Gene detail

Detailed information of g1549.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012567188.2, uncharacterized protein LOC105851038 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P12981	Transcription factor Jun OS=Coturnix japonica OX=93934 GN=JUN PE=2 SV=1
P18870	Transcription factor Jun OS=Gallus gallus OX=9031 GN=JUN PE=1 SV=2
P54864	Transcription factor Jun OS=Serinus canaria OX=9135 GN=JUN PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07731	Cu-oxidase_2	Multicopper oxidase	Domain	Interproscan
PF07732	Cu-oxidase_3	Multicopper oxidase	Domain	Interproscan
PF00394	Cu-oxidase	Multicopper oxidase	Domain	Interproscan
PF05992	SbmA_BacA	SbmA/BacA-like family	Family	Interproscan
PF01369	Sec7	Sec7 domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008972	Homologous_superfamily	Cupredoxin	Interproscan
IPR011706	Domain	Multicopper oxidase, C-terminal	Interproscan
IPR011707	Domain	Multicopper oxidase-like, N-terminal	Interproscan
IPR033138	Conserved_site	Multicopper oxidases, conserved site	Interproscan
IPR001117	Domain	Multicopper oxidase, second cupredoxin domain	Interproscan
IPR002355	Binding_site	Multicopper oxidase, copper-binding site	Interproscan
IPR045087	Family	Multicopper oxidase	Interproscan
IPR009248	Family	SbmA/BacA-like	Interproscan
IPR033053	Family	Histone transcription regulator 3/CABIN1	Interproscan
IPR035999	Homologous_superfamily	Sec7 domain superfamily	Interproscan
IPR000904	Domain	Sec7 domain	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR051320	Family	Viral Replication and Maturation Polyprotein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR002112	Family	Transcription factor Jun	Interproscan
IPR050946	Family	AP-1 Transcription Factor bZIP	Interproscan
IPR008917	Homologous_superfamily	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11709	MULTI-COPPER OXIDASE	Interproscan
PTHR15502	CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED	Interproscan
PTHR10663	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	Interproscan
PTHR33064	POL PROTEIN	Interproscan
PTHR31912	IP13529P	Interproscan
PTHR11462	JUN TRANSCRIPTION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0015833	Biological Process	peptide transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:1904680	Molecular Function	peptide transmembrane transporter activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006325	Biological Process	chromatin organization	Interproscan
GO:0031491	Molecular Function	nucleosome binding	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0032012	Biological Process	regulation of ARF protein signal transduction	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0042127	Biological Process	regulation of cell population proliferation	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04448	JUN; transcription factor AP-1	-	Transcription factors	ko03000	deepkoala