Detailed information of g155.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022107909.1, protein transport protein Sec16A-like isoform X3 [Acanthaster planci]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91XT4Protein transport protein Sec16B OS=Mus musculus OX=10090 GN=Sec16b PE=1 SV=3
Q75N33Protein transport protein Sec16B OS=Rattus norvegicus OX=10116 GN=Sec16b PE=1 SV=1
Q6BCB4Protein transport protein Sec16B OS=Oryctolagus cuniculus OX=9986 GN=SEC16B PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13871Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan
PF13872AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00742Homoserine_dhHomoserine dehydrogenaseDomainInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF12057BAG6BCL2-associated athanogene 6DomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF12932Sec16Vesicle coat trafficking protein Sec16 mid-regionDomainInterproscan
PF12931Sec16_CSec23-binding domain of Sec16DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026937DomainStrawberry notch, helicase C domainInterproscan
IPR039187DomainStrawberry notch, AAA domainInterproscan
IPR026741FamilyProtein strawberry notchInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR017096FamilyBTB-kelch proteinInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR001342DomainHomoserine dehydrogenase, catalyticInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR017937Conserved_siteThioredoxin, conserved siteInterproscan
IPR051063FamilyProtein Disulfide IsomeraseInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR021925DomainLarge proline-rich protein BAG6Interproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR019748DomainFERM central domainInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR024340DomainSec16, central conserved domainInterproscan
IPR024880FamilyCOPII coat assembly protein, Sec16Interproscan
IPR024298DomainAncestral coatomer element 1, Sec16/Sec31Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706STRAWBERRY NOTCH-RELATEDInterproscan
PTHR24412KELCH PROTEINInterproscan
PTHR43331HOMOSERINE DEHYDROGENASEInterproscan
PTHR46113SNAC DOMAIN-CONTAINING PROTEINInterproscan
PTHR45672PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATEDInterproscan
PTHR15204LARGE PROLINE-RICH PROTEIN BAG6Interproscan
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan
PTHR47960DEAD-BOX ATP-DEPENDENT RNA HELICASE 50Interproscan
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan
PTHR13402RGPR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0004412Molecular Functionhomoserine dehydrogenase activityInterproscan
GO:0009088Biological Processthreonine biosynthetic processInterproscan
GO:0003756Molecular Functionprotein disulfide isomerase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0051787Molecular Functionmisfolded protein bindingInterproscan
GO:0071818Cellular ComponentBAT3 complexInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0033962Biological ProcessP-body assemblyInterproscan
GO:0034063Biological Processstress granule assemblyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0012507Cellular ComponentER to Golgi transport vesicle membraneInterproscan
GO:0048208Biological ProcessCOPII vesicle coatingInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0070973Biological Processprotein localization to endoplasmic reticulum exit siteInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08209SLC22A13; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13-Membrane traffickingko04131deepkoala
Transportersko02000deepkoala
Chromosome and associated proteinsko03036deepkoala
Transportersko02000deepkoala

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