Detailed information of g1550.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004205719.2, putative uncharacterized protein DDB_G0282133 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8CGF6WD repeat-containing protein 47 OS=Mus musculus OX=10090 GN=Wdr47 PE=1 SV=2
O94967WD repeat-containing protein 47 OS=Homo sapiens OX=9606 GN=WDR47 PE=1 SV=1
Q9LXN4Protein HIRA OS=Arabidopsis thaliana OX=3702 GN=HIRA PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16366CEBP_ZZCytoplasmic polyadenylation element-binding protein ZZ domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF21588AP5B1_middleAP5B1, middle domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034819FamilyCytoplasmic polyadenylation element-binding proteinInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR038446Homologous_superfamilyCEBP, ZZ domain superfamilyInterproscan
IPR032296DomainCytoplasmic polyadenylation element-binding protein, ZZ domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR051131FamilyNEK Ser/Thr protein kinase family, NIMA subfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR040067FamilyWD repeat-containing protein 47Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR048979DomainAP5B1, middle domainInterproscan
IPR038741FamilyAP-5 complex subunit beta-1Interproscan
IPR029865FamilyDyslexia-associated protein KIAA0319-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12566CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEBInterproscan
PTHR44899CAMK FAMILY PROTEIN KINASEInterproscan
PTHR19863NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOGInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34033AP-5 COMPLEX SUBUNIT BETA-1Interproscan
PTHR46182FI19480P1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000900Molecular FunctionmRNA regulatory element binding translation repressor activityInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0008135Molecular Functiontranslation factor activity, RNA bindingInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:1990124Cellular Componentobsolete messenger ribonucleoprotein complexInterproscan
GO:2000766Biological Processnegative regulation of cytoplasmic translationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0030119Cellular ComponentAP-type membrane coat adaptor complexInterproscan
GO:0001764Biological Processneuron migrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24746WDR47; WD repeat-containing protein 47-Glycosaminoglycan binding proteinsko00536deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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