Gene detail

Detailed information of g1552.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: QQP36067.1, Uncharacterized protein FKW44_021045, partial [Caligus rogercresseyi]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
F4JJJ3	External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000001 (this species only)
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000017 (this species only)
Orthogroup (gene family)	OG0000017 (this species only)
Orthogroup (gene family)	OG0001584 (this species only)
Orthogroup (gene family)	OG0001683 (this species only)
Orthogroup (gene family)	OG0001993 (this species only)
Orthogroup (gene family)	OG0003139 (this species only)
Orthogroup (gene family)	OG0003413 (this species only)
Orthogroup (gene family)	OG0015509 (this species only)
Orthogroup (gene family)	OG0021362 (this species only)
Orthogroup (gene family)	OG0170746 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF02791 all species →	DDT	DDT domain	Family	Interproscan
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035848 all species →	Family	SH3 domain-binding protein 2	Interproscan
IPR018501 all species →	Domain	DDT domain	Interproscan
IPR047174 all species →	Family	Tyrosine-protein kinase BAZ1B	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR045024 all species →	Family	Alternative NADH dehydrogenase	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511 all species →	PROTEIN CBG23764	Interproscan
PTHR15126 all species →	SH3-BINDING	Interproscan
PTHR46802 all species →	TYROSINE-PROTEIN KINASE BAZ1B	Interproscan
PTHR43706 all species →	NADH DEHYDROGENASE	Interproscan
PTHR43520 all species →	ATP7, ISOFORM B	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR33332 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0017124 all species →	Molecular Function	SH3 domain binding	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006974 all species →	Biological Process	DNA damage response	Interproscan
GO:0035173 all species →	Molecular Function	histone kinase activity	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:0090535 all species →	Cellular Component	WICH complex	Interproscan
GO:0140801 all species →	Molecular Function	histone H2AXY142 kinase activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003954 all species →	Molecular Function	NADH dehydrogenase activity	Interproscan
GO:0006116 all species →	Biological Process	NADH oxidation	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015677 all species →	Biological Process	copper ion import	Interproscan
GO:0043682 all species →	Molecular Function	P-type divalent copper transporter activity	Interproscan
GO:0055070 all species →	Biological Process	copper ion homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03885	ndh; NADH:quinone reductase (non-electrogenic)	EC:1.6.5.9	Oxidative phosphorylation	ko00190	deepkoala
K17686	copA, ctpA, ATP7; P-type Cu+ transporter	EC:7.2.2.8	Platinum drug resistance	ko01524	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.