Detailed information of g15558.t1 in Montipora capitata

Genomic Location: Sc0000618:114459...139552
NR annotation: CAH3138116.1, unnamed protein product, partial [Porites lobata]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIH0Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1
Q9CWS4Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1
Q3MHC2Integrator complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Ints11 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16661
all species →
Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →
Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR041897
all species →
DomainIntegrator complex subunit 11, MBL-foldInterproscan
IPR050698
all species →
FamilyRNA Processing Metallo-Beta-Lactamase Domain-Containing ProteinInterproscan
IPR001279
all species →
DomainMetallo-beta-lactamaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11203
all species →
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004521
all species →
Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0016180
all species →
Biological ProcesssnRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g15558.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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