Detailed information of g1558.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047132860.1, exocyst complex component 5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00471Exocyst complex component 5 OS=Homo sapiens OX=9606 GN=EXOC5 PE=1 SV=1
Q3TPX4Exocyst complex component 5 OS=Mus musculus OX=10090 GN=Exoc5 PE=1 SV=2
P97878Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17846XRN_MXrn1 helical domainDomainInterproscan
PF03159XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan
PF00728Glyco_hydro_20Glycosyl hydrolase family 20, catalytic domainDomainInterproscan
PF03765CRAL_TRIO_NCRAL/TRIO, N-terminal domainDomainInterproscan
PF00650CRAL_TRIOCRAL/TRIO domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF20667Sec10_NExocyst complex component Sec10, N-terminalRepeatInterproscan
PF07393Sec10_HBExocyst complex component Sec10-like, alpha-helical bundleRepeatInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR041412DomainXrn1, helical domainInterproscan
IPR004859DomainXrn1, N-terminalInterproscan
IPR038901FamilyHexosaminidase D-likeInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR015883DomainGlycoside hydrolase family 20, catalytic domainInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR011074DomainCRAL/TRIO, N-terminal domainInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR036273Homologous_superfamilyCRAL/TRIO, N-terminal domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR048625DomainExocyst complex component Sec10, N-terminalInterproscan
IPR048627DomainExocyst complex component Sec10-like, alpha-helical bundleInterproscan
IPR009976FamilyExocyst complex component Sec10-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR050173FamilyATP-binding cassette transporter CInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR001708FamilyMembrane insertase YidC/ALB3/OXA1/COX18Interproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR051762FamilyUpstream Binding Factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan
PTHR21040UNCHARACTERIZEDInterproscan
PTHR10174ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATEDInterproscan
PTHR11451THREONINE-TRNA LIGASEInterproscan
PTHR12100SEC10Interproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR24223ATP-BINDING CASSETTE SUB-FAMILY CInterproscan
PTHR12428OXA1Interproscan
PTHR46318UPSTREAM BINDING TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004527Molecular Functionexonuclease activityInterproscan
GO:0015929Molecular Functionhexosaminidase activityInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:1902936Molecular Functionphosphatidylinositol bisphosphate bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000145Cellular ComponentexocystInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0031305Cellular Componentobsolete integral component of mitochondrial inner membraneInterproscan
GO:0032977Molecular Functionmembrane insertase activityInterproscan
GO:0032979Biological Processprotein insertion into mitochondrial inner membrane from matrixInterproscan
GO:0051205Biological Processprotein insertion into membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14459HEX; hexosaminidaseEC:3.2.1.52
Membrane traffickingko04131deepkoala
Transportersko02000deepkoala
Chromosome and associated proteinsko03036deepkoala
Other glycan degradationko00511deepkoala

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