Detailed information of g1559.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004207050.1, uncharacterized protein LOC101236484 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D8VNT0Ryncolin-4 OS=Cerberus rynchops OX=46267 PE=1 SV=1
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
Q29042Ficolin-1 OS=Sus scrofa OX=9823 GN=FCN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF16905GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan
PF21413SHQ1-like_CSSHQ1-like, CS domainDomainInterproscan
PF00787PXPX domainDomainInterproscan
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF08388GIIMGroup II intron, maturase-specific domainFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF16669TTC5_OBTetratricopeptide repeat protein 5 OB fold domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR005821DomainIon transport domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR031649DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR039742FamilyProtein Shq1Interproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR048696DomainSHQ1-like, CS domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR051837FamilySorting Nexin/PX Domain-Containing Protein Kinase-LikeInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR001683DomainPhox homologyInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR026581FamilyT-complex protein 10 familyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013597DomainGroup II intron, maturase-specificInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000123FamilyRNA-directed DNA polymerase (reverse transcriptase), msDNAInterproscan
IPR051083FamilyGroup II Intron Splicing and Mobility/DefenseInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR038645Homologous_superfamilyTTC5, OB fold domain superfamilyInterproscan
IPR050498FamilyPhotosystem I assembly protein Ycf3Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR032076DomainTetratricopeptide repeat protein 5, OB fold domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR12967UNCHARACTERIZEDInterproscan
PTHR22999PX SERINE/THREONINE KINASE PXKInterproscan
PTHR10331T COMPLEX PROTEIN 10Interproscan
PTHR24028CADHERIN-87AInterproscan
PTHR34047NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000493Biological Processbox H/ACA snoRNP assemblyInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0032780Biological Processnegative regulation of ATP-dependent activityInterproscan
GO:0043271Biological Processnegative regulation of monoatomic ion transportInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0061511Biological Processcentriole elongationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003964Molecular FunctionRNA-directed DNA polymerase activityInterproscan
GO:0006278Biological ProcessRNA-templated DNA biosynthetic processInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00986ltrA; RNA-directed DNA polymeraseEC:2.7.7.49
Ion channelsko04040deepkoala
Membrane traffickingko04131deepkoala
Enzymes with EC numbers-deepkoala

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