Detailed information of g1564.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3040934.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q33E94Transcription factor RFX4 OS=Homo sapiens OX=9606 GN=RFX4 PE=1 SV=2
A0A1L8GWK2Regulatory factor X 4 OS=Xenopus laevis OX=8355 GN=rfx4.L PE=2 SV=1
Q7TNK1Transcription factor RFX4 OS=Mus musculus OX=10090 GN=Rfx4 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyRFX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF01619Pro_dhProline dehydrogenaseFamilyInterproscan
PF14850Pro_dh-DNA_bdgDNA-binding domain of Proline dehydrogenaseDomainInterproscan
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan
PF13012MitMem_regMaintenance of mitochondrial structure and functionFamilyInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00589Phage_integrasePhage integrase familyFamilyInterproscan
PF10034Dpy19Q-cell neuroblast polarisationFamilyInterproscan
PF15253STIL_NSCL-interrupting locus protein N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016160Conserved_siteAldehyde dehydrogenase, cysteine active siteInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR025703FamilyBifunctional protein PutAInterproscan
IPR024089Homologous_superfamilyProline dehydrogenase PutA, domain I/IIInterproscan
IPR050485FamilyProline metabolism enzymeInterproscan
IPR005933DomainBifunctional protein PutA, C-terminal domainInterproscan
IPR002872DomainProline dehydrogenase domainInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR029041Homologous_superfamilyFAD-linked oxidoreductase-likeInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR024082DomainProline dehydrogenase PutA, domain IIInterproscan
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR039779FamilyRFX-like DNA-binding proteinInterproscan
IPR024969DomainEIF3F/CSN6-like, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051055FamilyPIF1 DNA helicaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR052925FamilyPhage Integrase-like RecombinaseInterproscan
IPR042502FamilyTransmembrane 7 superfamily member 3Interproscan
IPR018732FamilyDpy-19/Dpy-19-likeInterproscan
IPR026123FamilySCL-interrupting locus proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42862DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATEDInterproscan
PTHR12619RFX TRANSCRIPTION FACTOR FAMILYInterproscan
PTHR47642ATP-DEPENDENT DNA HELICASEInterproscan
PTHR34605PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15937TRANSMEMBRANE 7 SUPERFAMILY MEMBER 3Interproscan
PTHR31488DPY-19-LIKE 1, LIKE (H. SAPIENS)Interproscan
PTHR15128TAL1 SCL INTERRUPTING LOCUSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0003842Molecular Function1-pyrroline-5-carboxylate dehydrogenase activityInterproscan
GO:0004657Molecular Functionproline dehydrogenase activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010133Biological Processproline catabolic process to glutamateInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0006561Biological Processproline biosynthetic processInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0043069Biological Processnegative regulation of programmed cell deathInterproscan
GO:0000030Molecular Functionmannosyltransferase activityInterproscan
GO:0005637Cellular Componentnuclear inner membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0018406Biological Processprotein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophanInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0007224Biological Processsmoothened signaling pathwayInterproscan
GO:0051298Biological Processcentrosome duplicationInterproscan
GO:0071539Biological Processprotein localization to centrosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13821putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenaseEC:1.5.5.2
EC:1.2.1.88
Transcription factorsko03000deepkoala

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