Gene detail

Detailed information of g1566.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047124843.1, synaptotagmin-15 isoform X4 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DE95	Cullin-3-A OS=Xenopus laevis OX=8355 GN=cul3a PE=1 SV=1
Q6GPF3	Cullin-3-B OS=Xenopus laevis OX=8355 GN=cul3b PE=1 SV=1
Q13618	Cullin-3 OS=Homo sapiens OX=9606 GN=CUL3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000001 (this species only)
Orthogroup (gene family)	OG0000114 (this species only)
Orthogroup (gene family)	OG0000554 (this species only)
Orthogroup (gene family)	OG0001797 (this species only)
Orthogroup (gene family)	OG0002472 (this species only)
Orthogroup (gene family)	OG0009153 (this species only)
Orthogroup (gene family)	OG0022905 (this species only)
Orthogroup (gene family)	OG0032569 (this species only)
Orthogroup (gene family)	OG0171502 (this species only)
Orthogroup (gene family)	OG0172277 (this species only)
Orthogroup (gene family)	OG0173138 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|Cullin · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00888 all species →	Cullin	Cullin family	Repeat	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF03727 all species →	Hexokinase_2	Hexokinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR016159 all species →	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR045093 all species →	Family	Cullin	Interproscan
IPR001373 all species →	Domain	Cullin, N-terminal	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR022673 all species →	Domain	Hexokinase, C-terminal	Interproscan
IPR001312 all species →	Family	Hexokinase	Interproscan
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46670 all species →	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11932 all species →	CULLIN	Interproscan
PTHR10024 all species →	SYNAPTOTAGMIN	Interproscan
PTHR19443 all species →	HEXOKINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0031461 all species →	Cellular Component	cullin-RING ubiquitin ligase complex	Interproscan
GO:0031463 all species →	Cellular Component	Cul3-RING ubiquitin ligase complex	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0001786 all species →	Molecular Function	phosphatidylserine binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005544 all species →	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0014059 all species →	Biological Process	regulation of dopamine secretion	Interproscan
GO:0017156 all species →	Biological Process	calcium-ion regulated exocytosis	Interproscan
GO:0017158 all species →	Biological Process	regulation of calcium ion-dependent exocytosis	Interproscan
GO:0019905 all species →	Molecular Function	syntaxin binding	Interproscan
GO:0030276 all species →	Molecular Function	clathrin binding	Interproscan
GO:0048488 all species →	Biological Process	synaptic vesicle endocytosis	Interproscan
GO:0048791 all species →	Biological Process	calcium ion-regulated exocytosis of neurotransmitter	Interproscan
GO:0070382 all species →	Cellular Component	exocytic vesicle	Interproscan
GO:0071277 all species →	Biological Process	cellular response to calcium ion	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016773 all species →	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan
GO:0001678 all species →	Biological Process	intracellular glucose homeostasis	Interproscan
GO:0004340 all species →	Molecular Function	glucokinase activity	Interproscan
GO:0004396 all species →	Molecular Function	hexokinase activity	Interproscan
GO:0005536 all species →	Molecular Function	D-glucose binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006006 all species →	Biological Process	glucose metabolic process	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0008865 all species →	Molecular Function	fructokinase activity	Interproscan
GO:0046835 all species →	Biological Process	carbohydrate phosphorylation	Interproscan
GO:0051156 all species →	Biological Process	glucose 6-phosphate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g1566.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.