Detailed information of g1570.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012560161.2, protein c-Fos isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q9ZT94Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF01012ETFElectron transfer flavoprotein domainDomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF07716bZIP_2Basic region leucine zipperCoiled-coilInterproscan
PF06553BNIP3BNIP3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR014730DomainElectron transfer flavoprotein, alpha/beta-subunit, N-terminalInterproscan
IPR012255FamilyElectron transfer flavoprotein, beta subunitInterproscan
IPR033948DomainElectron transfer flavoprotein, beta subunit, N-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR050182FamilyCytochrome P450 family 2Interproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR000837FamilyAP-1 transcription factorInterproscan
IPR010548FamilyBNIP3Interproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR052957FamilyAuxin-regulated embryogenesis mediatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR21294ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNITInterproscan
PTHR22895UNCHARACTERIZEDInterproscan
PTHR24300CYTOCHROME P450 508A4-RELATEDInterproscan
PTHR23351FOS TRANSCRIPTION FACTOR-RELATEDInterproscan
PTHR15186RE48077PInterproscan
PTHR32387WU:FJ29H11Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006082Biological Processorganic acid metabolic processInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0008395Molecular Functionsteroid hydroxylase activityInterproscan
GO:0016712Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygenInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005740Cellular Componentmitochondrial envelopeInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0043065Biological Processpositive regulation of apoptotic processInterproscan
GO:0005741Cellular Componentmitochondrial outer membraneInterproscan
GO:0043067Biological Processregulation of programmed cell deathInterproscan
GO:0097345Biological Processmitochondrial outer membrane permeabilizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03521fixA, etfB; electron transfer flavoprotein beta subunit-Replication and repair-deepkoala
Energy metabolism-deepkoala

TOP