Detailed information of g1572.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KFD61493.1, hypothetical protein M514_26306 [Trichuris suis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96C34RUN domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RUNDC1 PE=1 SV=3
Q9H4W6Transcription factor COE3 OS=Homo sapiens OX=9606 GN=EBF3 PE=1 SV=2
O08791Transcription factor COE3 OS=Mus musculus OX=10090 GN=Ebf3 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyCOE
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16422COE1_DBDTranscription factor COE1 DNA-binding domainDomainInterproscan
PF16423COE1_HLHTranscription factor COE1 helix-loop-helix domainDomainInterproscan
PF01833TIGIPT/TIG domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF01079HintHint moduleFamilyInterproscan
PF02759RUNRUN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR032200DomainTranscription factor COE, DNA-binding domainInterproscan
IPR018350Conserved_siteTranscription factor COE, conserved siteInterproscan
IPR003523FamilyTranscription factor COEInterproscan
IPR032201DomainTranscription factor COE, helix-loop-helix domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR038173Homologous_superfamilyTranscription factor COE, DNA-binding domain superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR046355FamilyGRB2-associated-binding protein 1-4-likeInterproscan
IPR047157FamilyPHD and RING finger domain-containing protein 1-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001767DomainHedgehog protein, Hint domainInterproscan
IPR052140FamilyDevelopmental Signaling Hedgehog-likeInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan
IPR004012DomainRUN domainInterproscan
IPR047343FamilyAP-4 complex accessory subunit RUSC1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10747TRANSCRIPTION FACTOR COE FAMILY MEMBERInterproscan
PTHR45960GRB2-ASSOCIATED-BINDING PROTEINInterproscan
PTHR12618PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR46706PROTEIN QUA-1-RELATEDInterproscan
PTHR15591RUN AND SH3 DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0035591Molecular Functionsignaling adaptor activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09103EBF, COE; early B-cell factor-Transcription factorsko03000deepkoala

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