Gene detail

Detailed information of g1577.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047130818.1, GRIP and coiled-coil domain-containing protein 2-like isoform X4 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
D3ZZL9	GRIP and coiled-coil domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Gcc2 PE=1 SV=1
Q8CHG3	GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=3
Q8IWJ2	GRIP and coiled-coil domain-containing protein 2 OS=Homo sapiens OX=9606 GN=GCC2 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF20146	NRF	Nose resistant-to-fluoxetine protein, N-terminal domain	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF16704	Rab_bind	Rab binding domain	Domain	Interproscan
PF01465	GRIP	GRIP domain	Family	Interproscan
PF05577	Peptidase_S28	Serine carboxypeptidase S28	Domain	Interproscan
PF02724	CDC45	CDC45-like protein	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR006621	Domain	Nose resistant-to-fluoxetine protein, N-terminal	Interproscan
IPR052728	Family	Oxygen and lipid transport regulator	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR051001	Family	Calbindin Calcium-Binding	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR000237	Domain	GRIP domain	Interproscan
IPR051841	Family	Microtubule and Golgi organization protein	Interproscan
IPR032023	Domain	GCC2, Rab binding domain	Interproscan
IPR008758	Family	Peptidase S28	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR042269	Homologous_superfamily	Serine carboxypeptidase S28, SKS domain	Interproscan
IPR003874	Family	CDC45 family	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR11161	O-ACYLTRANSFERASE	Interproscan
PTHR19972	CALBINDIN	Interproscan
PTHR18902	NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED	Interproscan
PTHR11010	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10507	CDC45-RELATED PROTEIN	Interproscan
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0045202	Cellular Component	synapse	Interproscan
GO:0051480	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0005768	Cellular Component	endosome	Interproscan
GO:0008239	Molecular Function	dipeptidyl-peptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0070008	Molecular Function	serine-type exopeptidase activity	Interproscan
GO:0000727	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006270	Biological Process	DNA replication initiation	Interproscan
GO:0031261	Cellular Component	DNA replication preinitiation complex	Interproscan
GO:1902977	Biological Process	mitotic DNA replication preinitiation complex assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09649	PRSS16; thymus-specific serine protease	EC:3.4.-.-	Membrane trafficking	ko04131	deepkoala
K09649	PRSS16; thymus-specific serine protease	EC:3.4.-.-	Peptidases and inhibitors	ko01002	deepkoala