Detailed information of g1580.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: QQP54854.1, Transposon Tf2-6 polyprotein, partial [Caligus rogercresseyi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TD08Enzymatic polyprotein OS=Cestrum yellow leaf curling virus OX=175814 GN=ORF V PE=3 SV=1
P15629Enzymatic polyprotein OS=Soybean chlorotic mottle virus OX=10651 GN=ORF V PE=3 SV=2
Q8BGE5Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF13347MFS_2MFS/sugar transport proteinFamilyInterproscan
PF16783FANCM-MHF_bdFANCM to MHF binding domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF10584Proteasome_A_NProteasome subunit A N-terminal signatureFamilyInterproscan
PF00227ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR036802Homologous_superfamilyATP:guanido phosphotransferase, N-terminal domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR039672FamilyLactose permease-likeInterproscan
IPR039686DomainFANCM/Mph1-like, insert domainInterproscan
IPR031879DomainFanconi anemia group M protein, MHF binding domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044749DomainFANCM, DEAH-box helicase domainInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR000426DomainProteasome alpha-subunit, N-terminal domainInterproscan
IPR050115FamilyProteasome subunit alphaInterproscan
IPR023332FamilyProteasome alpha-type subunitInterproscan
IPR034642FamilyProteasome subunit alpha6Interproscan
IPR001353FamilyProteasome, subunit alpha/betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan
PTHR11328MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEINInterproscan
PTHR14025FANCONI ANEMIA GROUP M FANCM FAMILY MEMBERInterproscan
PTHR11599PROTEASOME SUBUNIT ALPHA/BETAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0008643Biological Processcarbohydrate transportInterproscan
GO:0015293Molecular Functionsymporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0071702Biological Processobsolete organic substance transportInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0000400Molecular Functionfour-way junction DNA bindingInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0045003Biological Processdouble-strand break repair via synthesis-dependent strand annealingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0019773Cellular Componentproteasome core complex, alpha-subunit complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010498Biological Processproteasomal protein catabolic processInterproscan
GO:0005839Cellular Componentproteasome core complexInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26437MFSD12; major facilitator superfamily domain-containing protein 12-DNA repair and recombination proteinsko03400deepkoala
Proteasomeko03051deepkoala
Transportersko02000deepkoala

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