Detailed information of g15808.t1 in Acropora digitifera

Genomic Location: chr7Alt:18881254...18883165
NR annotation: XP_022782695.1, uncharacterized protein LOC111323575 [Stylophora pistillata]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Transcription factor familyTHAP · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13613
all species →		HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF05485
all species →		THAPTHAP domainDomainInterproscan
PF13359
all species →		DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006612
all species →		DomainTHAP-type zinc fingerInterproscan
IPR027805
all species →		DomainTransposase, Helix-turn-helix domainInterproscan
IPR027806
all species →		DomainHarbinger transposase-derived nuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23080
all species →		THAP DOMAIN PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g15808.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g15808.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP