Detailed information of g1581.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: TDL20802.1, WD40 repeat-like protein [Rickenella mellea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A6QLH6N-terminal kinase-like protein OS=Bos taurus OX=9913 GN=SCYL1 PE=2 SV=1
Q80WQ9Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1
Q5ZLG0Acetoacetyl-CoA synthetase OS=Gallus gallus OX=9031 GN=AACS PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-BED

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14802TMEM192TMEM192 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR052717FamilyVacuolar processing and transposase activity regulatorsInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR051177FamilyCatalytically Inactive Kinase-Related ProteinInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029399FamilyTMEM192 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46169DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM AInterproscan
PTHR12984SCY1-RELATED S/T PROTEIN KINASE-LIKEInterproscan
PTHR42921ACETOACETYL-COA SYNTHETASEInterproscan
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan
PTHR31592TRANSMEMBRANE PROTEIN 192Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030729Molecular Functionacetoacetate-CoA ligase activityInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan

TOP