Detailed information of g1583.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_044173928.1, WASH complex subunit 5-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12768WASH complex subunit 5 OS=Homo sapiens OX=9606 GN=WASHC5 PE=1 SV=1
Q5R5P0WASH complex subunit 5 OS=Pongo abelii OX=9601 GN=WASHC5 PE=2 SV=1
Q6DIP9WASH complex subunit 5 OS=Xenopus tropicalis OX=8364 GN=washc5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF01406tRNA-synt_1etRNA synthetases class I (C) catalytic domainFamilyInterproscan
PF028262-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domainDomainInterproscan
PF003892-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainDomainInterproscan
PF19304PGDH_interD-3-phosphoglycerate dehydrogenase intervening domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF15753BLOC1S3Biogenesis of lysosome-related organelles complex 1 subunit 3FamilyInterproscan
PF10266StrumpellinHereditary spastic paraplegia protein strumpellinFamilyInterproscan
PF05934MCLCMid-1-related chloride channel (MCLC)FamilyInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051603FamilyZinc-Containing ADH Family: Quinone Oxidoreductase/CCCRInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR032678DomaintRNA synthetases class I, catalytic domainInterproscan
IPR024909FamilyCysteinyl-tRNA synthetase/mycothiol ligaseInterproscan
IPR015803FamilyCysteine-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR029752Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1Interproscan
IPR029753Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved siteInterproscan
IPR029009Homologous_superfamilyAllosteric substrate binding domain superfamilyInterproscan
IPR006140DomainD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainInterproscan
IPR006139DomainD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainInterproscan
IPR045626DomainD-3-phosphoglycerate dehydrogenase, ASB domainInterproscan
IPR052129FamilySpermadhesin-Link domain-containing proteinInterproscan
IPR000859DomainCUB domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR017245FamilyBLOC-1 complex, subunit 3Interproscan
IPR019393FamilyWASH complex, subunit strumpellinInterproscan
IPR009231FamilyChloride channel CLIC-likeInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44154QUINONE OXIDOREDUCTASEInterproscan
PTHR10890CYSTEINYL-TRNA SYNTHETASEInterproscan
PTHR42938FORMATE DEHYDROGENASE 1Interproscan
PTHR46908CUBILIN-LIKE PROTEINInterproscan
PTHR15691WASH COMPLEX SUBUNIT 5Interproscan
PTHR34093CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1Interproscan
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0003960Molecular FunctionNADPH:quinone reductase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0070402Molecular FunctionNADPH bindingInterproscan
GO:0004817Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006423Biological Processcysteinyl-tRNA aminoacylationInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0004617Molecular Functionphosphoglycerate dehydrogenase activityInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0051125Biological Processregulation of actin nucleationInterproscan
GO:0071203Cellular ComponentWASH complexInterproscan
GO:0140285Biological Processendosome fissionInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00058serA, PHGDH; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductaseEC:1.1.1.95
EC:1.1.1.399
Membrane traffickingko04131deepkoala
Transfer RNA biogenesisko03016deepkoala
Exosomeko04147deepkoala

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