Detailed information of g1586.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_009814981.1, PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Gavia stellata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IWV8E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN=UBR2 PE=1 SV=1
Q6WKZ8E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2
Q8IWV7E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens OX=9606 GN=UBR1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13207AAA_17AAA domainDomainInterproscan
PF01019G_glu_transpeptGamma-glutamyltranspeptidaseDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF09079Cdc6_CCDC6, C terminal winged helix domainDomainInterproscan
PF17872AAA_lid_10AAA lid domainDomainInterproscan
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00387PI-PLC-YPhosphatidylinositol-specific phospholipase C, Y domainFamilyInterproscan
PF00388PI-PLC-XPhosphatidylinositol-specific phospholipase C, X domainFamilyInterproscan
PF18995PRT6_CProteolysis_6 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000101FamilyGamma-glutamyltranspeptidaseInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR043138Homologous_superfamilyGamma-glutamyltranspeptidase, large subunit, C-terminal domainInterproscan
IPR043137Homologous_superfamilyGamma-glutamyltranspeptidase, small subunitInterproscan
IPR015163DomainCdc6, C-terminalInterproscan
IPR050311FamilyOrigin Recognition Complex 1/Cell Division Control Protein 6Interproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR041083DomainAAA lid domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045111FamilyVacuolar protein sorting-associated protein Vps41/Vps8Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001192FamilyPhosphoinositide phospholipase C familyInterproscan
IPR001711DomainPhospholipase C, phosphatidylinositol-specific, Y domainInterproscan
IPR000909DomainPhosphatidylinositol-specific phospholipase C, X domainInterproscan
IPR017946Homologous_superfamilyPLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyInterproscan
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR044046DomainE3 ubiquitin-protein ligase UBR-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11686GAMMA GLUTAMYL TRANSPEPTIDASEInterproscan
PTHR10763CELL DIVISION CONTROL PROTEIN 6-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12616VACUOLAR PROTEIN SORTING VPS41Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR10336PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEINInterproscan
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006751Biological Processglutathione catabolic processInterproscan
GO:0036374Molecular Functionglutathione hydrolase activityInterproscan
GO:0003688Molecular FunctionDNA replication origin bindingInterproscan
GO:0005664Cellular Componentnuclear origin of replication recognition complexInterproscan
GO:0006270Biological ProcessDNA replication initiationInterproscan
GO:0033314Biological Processmitotic DNA replication checkpoint signalingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0009267Biological Processcellular response to starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan
GO:0004435Molecular Functionphosphatidylinositol phospholipase C activityInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0048015Biological Processphosphatidylinositol-mediated signalingInterproscan
GO:0051209Biological Processrelease of sequestered calcium ion into cytosolInterproscan
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02603ORC1; origin recognition complex subunit 1-CD moleculesko04090deepkoala
Chromosome and associated proteinsko03036deepkoala

TOP