Genomic Location: Sc0000642:136961...141121
NR annotation: KAJ7390451.1, DNA damage-binding protein 1 [Desmophyllum pertusum]
Species abbreviation MCAPI · all data for this species · gene families
| CDS |
| g15860.t1 |
| Transcript |
| g15860.t1 |
| Protein |
| g15860.t1 |
| UniProt accession | Description |
|---|---|
| A1A4K3 | DNA damage-binding protein 1 OS=Bos taurus OX=9913 GN=DDB1 PE=1 SV=1 |
| P33194 | DNA damage-binding protein 1 OS=Chlorocebus aethiops OX=9534 GN=DDB1 PE=1 SV=1 |
| Q16531 | DNA damage-binding protein 1 OS=Homo sapiens OX=9606 GN=DDB1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003786 (this species only) |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DDB1 · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03178 all species → | CPSF_A | CPSF A subunit region | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR050358 all species → | Family | RSE1/DDB1/CFT1/CPSF1 | Interproscan |
| IPR004871 all species → | Domain | Cleavage/polyadenylation specificity factor, A subunit, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10644 all species → | DNA REPAIR/RNA PROCESSING CPSF FAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0035861 all species → | Cellular Component | site of double-strand break | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
g15860.t1.
