Detailed information of g15861.t1 in Montipora capitata

Genomic Location: Sc0000642:145363...161249
NR annotation: KAJ7390451.1, DNA damage-binding protein 1 [Desmophyllum pertusum]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3U1J4DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2
Q5R649DNA damage-binding protein 1 OS=Pongo abelii OX=9601 GN=DDB1 PE=2 SV=1
Q6P6Z0DNA damage-binding protein 1 OS=Xenopus laevis OX=8355 GN=ddb1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003786 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|DDB1 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10433
all species →		MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR018846
all species →		DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan
IPR050358
all species →		FamilyRSE1/DDB1/CFT1/CPSF1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644
all species →		DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g15861.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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