Detailed information of g1589.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012558303.2, cartilage oligomeric matrix protein isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P35445Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P35444Cartilage oligomeric matrix protein OS=Rattus norvegicus OX=10116 GN=Comp PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018506Binding_siteCytochrome b5, heme-binding siteInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR051872FamilyCytochrome b5/Flavoprotein ReductaseInterproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR006602DomainDM10 domainInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR000837FamilyAP-1 transcription factorInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46237CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBERInterproscan
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24178MOLTING PROTEIN MLT-4Interproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR43109NUCLEOSIDE DIPHOSPHATE KINASE 7Interproscan
PTHR23351FOS TRANSCRIPTION FACTOR-RELATEDInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0020037Molecular Functionheme bindingInterproscan
GO:0004128Molecular Functioncytochrome-b5 reductase activity, acting on NAD(P)HInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006091Biological Processgeneration of precursor metabolites and energyInterproscan
GO:0006801Biological Processsuperoxide metabolic processInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0097543Cellular Componentciliary inversin compartmentInterproscan
GO:1904108Biological Processprotein localization to ciliary inversin compartmentInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04659THBS2S; thrombospondin 2/3/4/5-Glycosaminoglycan binding proteinsko00536deepkoala

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