Detailed information of g159.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047134090.1, gastrula zinc finger protein XlCGF57.1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P53804E3 ubiquitin-protein ligase TTC3 OS=Homo sapiens OX=9606 GN=TTC3 PE=1 SV=2
Q7TPV2E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus OX=10090 GN=Dzip3 PE=1 SV=2
Q86Y13E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens OX=9606 GN=DZIP3 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyE3|E3 activity RING|RING
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00202Aminotran_3Aminotransferase class-IIIDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF19179TTC3_DZIP3_domE3 ubiquitin-protein ligase TTC3/DZIP3 domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF03166MH2MH2 domainFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF02807ATP-gua_PtransNATP:guanido phosphotransferase, N-terminal domainDomainInterproscan
PF00217ATP-gua_PtransATP:guanido phosphotransferase, C-terminal catalytic domainDomainInterproscan
PF02944BESSBESS motifMotifInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031481DomainFucosyltransferase, N-terminalInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR026103FamilyHarbinger transposase-derived nuclease, animalInterproscan
IPR005814FamilyAminotransferase class-IIIInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049704Conserved_siteAminotransferases class-III pyridoxal-phosphate attachment siteInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR050103FamilyClass-III Pyridoxal-phosphate-dependent AminotransferaseInterproscan
IPR010164FamilyOrnithine aminotransferaseInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR043866DomainE3 ubiquitin-protein ligase TTC3/DZIP3 domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR050331FamilyZinc fingerInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR013790FamilyDwarfinInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR036802Homologous_superfamilyATP:guanido phosphotransferase, N-terminal domain superfamilyInterproscan
IPR022414DomainATP:guanido phosphotransferase, catalytic domainInterproscan
IPR022413DomainATP:guanido phosphotransferase, N-terminalInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR022415Active_siteATP:guanido phosphotransferase active siteInterproscan
IPR000749FamilyATP:guanido phosphotransferaseInterproscan
IPR004210DomainBESS motifInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48350ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATEDInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR11986AMINOTRANSFERASE CLASS IIIInterproscan
PTHR17550E3 UBIQUITIN-PROTEIN LIGASE TTC3Interproscan
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan
PTHR13703SMADInterproscan
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR11547ARGININE OR CREATINE KINASEInterproscan
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0008483Molecular Functiontransaminase activityInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0004587Molecular Functionornithine aminotransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0010121Biological Processarginine catabolic process to proline via ornithineInterproscan
GO:0019544Biological Processarginine catabolic process to glutamateInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030509Biological ProcessBMP signaling pathwayInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004111Molecular Functioncreatine kinase activityInterproscan
GO:0046314Biological Processphosphocreatine biosynthetic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23222HARBI1; nuclease HARBI1EC:3.1.-.-
Ubiquitin systemko04121deepkoala
Exosomeko04147deepkoala
Various types of N-glycan biosynthesisko00513deepkoala
Amino acid related enzymesko01007deepkoala
Chromosome and associated proteinsko03036deepkoala

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