Detailed information of g1594.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002158303.2, E3 ubiquitin-protein ligase arih1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6NW85E3 ubiquitin-protein ligase arih1l OS=Danio rerio OX=7955 GN=arih1l PE=2 SV=1
Q32NS4E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis OX=8355 GN=arih1 PE=2 SV=1
B1H1E4E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis OX=8364 GN=arih1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03385STELLOSTELLO glycosyltransferasesFamilyInterproscan
PF21399TERT_CTelomerase reverse transcriptase, C-terminal extensionDomainInterproscan
PF12009Telomerase_RBDTelomerase ribonucleoprotein complex - RNA binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF11326DUF3128Protein of unknown function (DUF3128)FamilyInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF19422AriadneAriadne domainDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF21235ARI1_UBAlE3 ubiquitin-protein ligase ARIH1, UBA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005049FamilySTELLO-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR003545FamilyTelomerase reverse transcriptaseInterproscan
IPR049139DomainTelomerase reverse transcriptase, C-terminal extensionInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021891DomainTelomerase ribonucleoprotein complex - RNA-binding domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR021475FamilyPlasticity-Associated Neural Transcript Short/Early meiotic induction protein 1-likeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR002867DomainIBR domainInterproscan
IPR045840DomainAriadne domainInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR048962DomainE3 ubiquitin-protein ligase ARIH1-like, UBA-like domainInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31362GLYCOSYLTRANSFERASE STELLO1-RELATEDInterproscan
PTHR12066TELOMERASE REVERSE TRANSCRIPTASEInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR28052UPF0545 PROTEIN C22ORF39Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000333Cellular Componenttelomerase catalytic core complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003721Molecular Functionobsolete telomerase RNA reverse transcriptase activityInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan
GO:0003964Molecular FunctionRNA-directed DNA polymerase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11126TERT, EST2; telomerase reverse transcriptaseEC:2.7.7.49
Ubiquitin systemko04121deepkoala
Glycosyltransferasesko01003deepkoala
DNA replication proteinsko03032deepkoala

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