Detailed information of g16.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_155153587.1, argininosuccinate lyase [Curvivirga aplysinae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A3PMB7Argininosuccinate lyase OS=Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=argH PE=3 SV=1
Q3IZY2Argininosuccinate lyase OS=Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=argH PE=3 SV=1
Q8U9X6Argininosuccinate lyase 1 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=argH1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF00206Lyase_1LyaseDomainInterproscan
PF14698ASL_C2Argininosuccinate lyase C-terminalDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01039Carboxyl_transCarboxyl transferase domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR008948Homologous_superfamilyL-Aspartase-likeInterproscan
IPR022761DomainFumarate lyase, N-terminalInterproscan
IPR009049FamilyArgininosuccinate lyaseInterproscan
IPR029419DomainArgininosuccinate lyase, C-terminalInterproscan
IPR000362FamilyFumarate lyase familyInterproscan
IPR024083Homologous_superfamilyFumarase/histidase, N-terminalInterproscan
IPR020557Conserved_siteFumarate lyase, conserved siteInterproscan
IPR003410DomainHYR domainInterproscan
IPR043555FamilySushi repeat-containing protein SRPX-likeInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR011762DomainAcetyl-coenzyme A carboxyltransferase, N-terminalInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR011763DomainAcetyl-coenzyme A carboxyltransferase, C-terminalInterproscan
IPR034733DomainAcetyl-coenzyme A carboxylase carboxyl transferase subunit betaInterproscan
IPR045190FamilyMethylcrotonoyl-CoA carboxylase beta chain MCCB/AccD1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan
PTHR43814ARGININOSUCCINATE LYASEInterproscan
PTHR46343HYR DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR22855ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004056Molecular Functionargininosuccinate lyase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0042450Biological Processarginine biosynthetic process via ornithineInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0004485Molecular Functionmethylcrotonoyl-CoA carboxylase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006552Biological ProcessL-leucine catabolic processInterproscan
GO:1905202Cellular Componentmethylcrotonoyl-CoA carboxylase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01969MCCC2, accD1; 3-methylcrotonyl-CoA carboxylase beta subunitEC:6.4.1.4
Exosomeko04147deepkoala
Valine, leucine and isoleucine degradationko00280deepkoala

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