Genomic Location: not available for this species
NR annotation: XP_046846790.1, uncharacterized protein LOC124440439 [Xenia sp. Carnegie-2017]
Species Calvadosia cruxmelitensis · all data for this species · gene families
| UniProt accession | Description |
|---|---|
| O75907 | Diacylglycerol O-acyltransferase 1 OS=Homo sapiens OX=9606 GN=DGAT1 PE=1 SV=2 |
| Q9ERM3 | Diacylglycerol O-acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Dgat1 PE=2 SV=1 |
| Q9GMF1 | Diacylglycerol O-acyltransferase 1 OS=Chlorocebus aethiops OX=9534 GN=DGAT1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000005 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000006 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000146 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000154 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0004386 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0012304 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0014236 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04434 all species → | SWIM | SWIM zinc finger | Domain | Interproscan |
| PF21056 all species → | ZSWIM1-3_RNaseH-like | Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain | Domain | Interproscan |
| PF03062 all species → | MBOAT | MBOAT, membrane-bound O-acyltransferase family | Family | Interproscan |
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007527 all species → | Domain | Zinc finger, SWIM-type | Interproscan |
| IPR048324 all species → | Domain | ZSWIM1/3, RNaseH-like domain | Interproscan |
| IPR004299 all species → | Family | Membrane bound O-acyl transferase, MBOAT | Interproscan |
| IPR014371 all species → | Family | Sterol O-acyltransferase, ACAT/DAG/ARE types | Interproscan |
| IPR004210 all species → | Domain | BESS motif | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47456 all species → | PHD-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| PTHR10408 all species → | STEROL O-ACYLTRANSFERASE | Interproscan |
| PTHR47027 all species → | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0004144 all species → | Molecular Function | diacylglycerol O-acyltransferase activity | Interproscan |
| GO:0005789 all species → | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0008374 all species → | Molecular Function | O-acyltransferase activity | Interproscan |
| GO:0019432 all species → | Biological Process | triglyceride biosynthetic process | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
g1602.t1.Genes whose expression across the transcriptome samples of Calvadosia cruxmelitensis tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Calvadosia cruxmelitensis, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | sequence table not available | – |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | sequence table not available | – |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
