Detailed information of g1604.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAF5900041.1, fucolectin-like, partial [Clarias magur]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91ZY8E3 ubiquitin-protein ligase TRIM9 OS=Rattus norvegicus OX=10116 GN=Trim9 PE=1 SV=1
Q9C026E3 ubiquitin-protein ligase TRIM9 OS=Homo sapiens OX=9606 GN=TRIM9 PE=1 SV=1
Q29RQ5E3 ubiquitin-protein ligase TRIM9 OS=Bos taurus OX=9913 GN=TRIM9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR050617FamilyE3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteinsInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR31751SI:CH211-108C17.2-RELATED-RELATEDInterproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR24099E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

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