Detailed information of g1605.t2 in Acropora digitifera

Genomic Location: chr1Alt:26603389...26646261
NR annotation: XP_044167500.1, UDP-glucose:glycoprotein glucosyltransferase 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P5E4UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4
Q9JLA3UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2
Q9NYU2UDP-glucose:glycoprotein glucosyltransferase 1 OS=Homo sapiens OX=9606 GN=UGGT1 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18400
all species →
Thioredoxin_12Thioredoxin-like domainDomainInterproscan
PF18403
all species →
Thioredoxin_15Thioredoxin-like domainDomainInterproscan
PF18401
all species →
Thioredoxin_13Thioredoxin-like domainDomainInterproscan
PF06427
all species →
UDP-g_GGTaseUDP-glucose:Glycoprotein GlucosyltransferaseDomainInterproscan
PF18402
all species →
Thioredoxin_14Thioredoxin-like domainDomainInterproscan
PF18404
all species →
Glyco_transf_24Glucosyltransferase 24DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040693
all species →
DomainUGGT, thioredoxin-like domain 1Interproscan
IPR009448
all species →
FamilyUDP-glucose:Glycoprotein GlucosyltransferaseInterproscan
IPR040525
all species →
DomainUDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4Interproscan
IPR040694
all species →
DomainUGGT, thioredoxin-like domain 2Interproscan
IPR029044
all species →
Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR040692
all species →
DomainUGGT, thioredoxin-like domain 3Interproscan
IPR040497
all species →
DomainGlucosyltransferase 24, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11226
all species →
UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003980
all species →
Molecular FunctionUDP-glucose:glycoprotein glucosyltransferase activityInterproscan
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan
GO:0006486
all species →
Biological Processprotein glycosylationInterproscan
GO:0018279
all species →
Biological Processprotein N-linked glycosylation via asparagineInterproscan
GO:0051082
all species →
Molecular Functionunfolded protein bindingInterproscan
GO:0071712
all species →
Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11718HUGT; UDP-glucose:glycoprotein glucosyltransferaseEC:2.4.1.-
Glycosyltransferasesko01003deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g1605.t2 across 39 RNA-seq samples of Acropora digitifera. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

39Samples
0TPM > 0
1Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Coral branch 39 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM, StringTie quantification over 39 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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