Gene detail

Detailed information of g16112.t1 in Montipora capitata

Genomic Location: Sc0000660:84223...89654
NR annotation: XP_029194397.2, LOW QUALITY PROTEIN: mannosyl-oligosaccharide glucosidase-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g16112.t1

atggtgcggcaacgaaaaggcagacctcatttagattcaatcaaagatcactccaataagtcaaagttcacgcgtcgccgtgaaaacgaatcttctgtcactttattccttctcttagcagcccttgttgttggcttcactttgtgtggattaggagcttacaaactctggaattacaaactttccgcacgtctttacacgccactcaacgcacccttagtaataaacaggattgagagtgatatgacccgcttttgggggagttatcgcacaaatttatactttggaatgagaacacgtagtccccagtcgctcatgacagggttgatgtggttcccacactttgaacctaatggagaaatgaatattcgtcacacttgtgaacaatcggatgggctccacaagtatggctggctcaagcatgatggcaccaactttggatcacaagaaatagttgatatggattttgcattgaatacagactttgtaaagaaaatgggaggagatcatggaggggactggacagtgaggatttcagggagggaaatgggcaacctaaaccaggtggtgtcattaatgttctatgctactcatgaaggacaagttcaaatgaagcctgctgtagataagaacatgtttacagcactgcaaggcaattcacctgaattaggcttattcacactgcatttttcacgccccttgaagattatatattcctcctttttggcggctcatactccaaatgtgcattcagttaaggatgttgttatacgcaatatgggactagcgaagaagctaaaaggggctgaaaaattgcagttagtgcggttacctgggcgtgtaactagtcgtgacgaagatgggagagaattgccaacaaacttatttgttcagcattggacacttcagcttccttttgacgtagagatcgcatttgagtctgggagttttcttacaagaggagacagattattgggtcctgcatttgaaagtcttagaaaccactacagcgatcagtttgataggaaatttgaagagaagttcactttggcctctgaaggcttcaccaacgaagaagtacgctttgcccaagcagctcttagcaacatgatcgggggaatcggatatttctatggaagttcaaaggtgatttcacgttacttcaagaagccagtagattactggaatagcgctttgtacaccgcagtgccttcacgccctttttttcctcgtggatttctgtgggatgagggatttcatcagctactcatcagccaatgggatgaaagcatcagtaaggacatcatcggccactggctagacttgataaatatagaaggttggattccaagagaacaaattctcggcgacgaagctcggacaaaagtcccatccgattttgttgtgcaacacaacgaaaacgccaacccgccaactctgattcttcctatcaagtccatggtggataagggcgtcttggatgaaagatacctgcgcaagatatttcctcggttaaaggcttggtttaactggtttaataccacacagttgggaaaactaccatccacttataggtggcatgggcgagatgccaagacggacaaggagctgaatcccaagacactgacctctgggttggatgattatccacgcgcatcacacccttcggatgatgaaagacacgtggatttacgttgctggatgtcatttgccgctggtttgatggccgatattgctgaggctgtcagtgagaaatctgatgctgtgctctataggtccaccagtgactatctctctgacaacaagctgctcgacaagtatcattggtcgtccaaggcagaatcatatagtgattatggtaatcataccaagtttgtaaagcttgttcaacgtgctattcaaccctcgcaaccagggagtccgaagaaaacggttcgtatcgtgacttctaaacaaggtccatctctcaagtttgtgaatgctctcggctatgtcagcctgttccccttcctgctgcaaatcttagaccctgcgtctcccaagctggaaaaagtcttaaaggatttgagagatcctgaacggctttggagcgaatatggattaagatctttatcacaaagtaactccatctataagacatacaacactgagcacgatgcgccttattggagaggagctatctggatcaacatcaactacttagcagttagagctctgaattattacgctagtattgcggggccatatcagagcatggctaaagagatttatacagacttacgccttaatttaattcgtaatatgttgagagagtaccagagaacggggtttatatgggaacaatacgatgacgttacgggacacgggaaagggtcgcacccatttacgggatggtcttcgcttgttgttcttatgatgtcagagcatttttaa

Transcript

g16112.t1

ATGGTGCGGCAACGAAAAGGCAGACCTCATTTAGATTCAATCAAAGATCACTCCAATAAGTCAAAGTTCACGCGTCGCCGTGAAAACGAATCTTCTGTCACTTTATTCCTTCTCTTAGCAGCCCTTGTTGTTGGCTTCACTTTGTGTGGATTAGGAGCTTACAAACTCTGGAATTACAAACTTTCCGCACGTCTTTACACGCCACTCAACGCACCCTTAGTAATAAACAGGATTGAGAGTGATATGACCCGCTTTTGGGGGAGTTATCGCACAAATTTATACTTTGGAATGAGAACACGTAGTCCCCAGTCGCTCATGACAGGGTTGATGTGGTTCCCACACTTTGAACCTAATGGAGAAATGAATATTCGTCACACTTGTGAACAATCGGATGGGCTCCACAAGTATGGCTGGCTCAAGCATGATGGCACCAACTTTGGATCACAAGAAATAGTTGATATGGATTTTGCATTGAATACAGACTTTGTAAAGAAAATGGGAGGAGATCATGGAGGGGACTGGACAGTGAGGATTTCAGGGAGGGAAATGGGCAACCTAAACCAGGTGGTGTCATTAATGTTCTATGCTACTCATGAAGGACAAGTTCAAATGAAGCCTGCTGTAGATAAGAACATGTTTACAGCACTGCAAGGCAATTCACCTGAATTAGGCTTATTCACACTGCATTTTTCACGCCCCTTGAAGATTATATATTCCTCCTTTTTGGCGGCTCATACTCCAAATGTGCATTCAGTTAAGGATGTTGTTATACGCAATATGGGACTAGCGAAGAAGCTAAAAGGGGCTGAAAAATTGCAGTTAGTGCGGTTACCTGGGCGTGTAACTAGTCGTGACGAAGATGGGAGAGAATTGCCAACAAACTTATTTGTTCAGCATTGGACACTTCAGCTTCCTTTTGACGTAGAGATCGCATTTGAGTCTGGGAGTTTTCTTACAAGAGGAGACAGATTATTGGGTCCTGCATTTGAAAGTCTTAGAAACCACTACAGCGATCAGTTTGATAGGAAATTTGAAGAGAAGTTCACTTTGGCCTCTGAAGGCTTCACCAACGAAGAAGTACGCTTTGCCCAAGCAGCTCTTAGCAACATGATCGGGGGAATCGGATATTTCTATGGAAGTTCAAAGGTGATTTCACGTTACTTCAAGAAGCCAGTAGATTACTGGAATAGCGCTTTGTACACCGCAGTGCCTTCACGCCCTTTTTTTCCTCGTGGATTTCTGTGGGATGAGGGATTTCATCAGCTACTCATCAGCCAATGGGATGAAAGCATCAGTAAGGACATCATCGGCCACTGGCTAGACTTGATAAATATAGAAGGTTGGATTCCAAGAGAACAAATTCTCGGCGACGAAGCTCGGACAAAAGTCCCATCCGATTTTGTTGTGCAACACAACGAAAACGCCAACCCGCCAACTCTGATTCTTCCTATCAAGTCCATGGTGGATAAGGGCGTCTTGGATGAAAGATACCTGCGCAAGATATTTCCTCGGTTAAAGGCTTGGTTTAACTGGTTTAATACCACACAGTTGGGAAAACTACCATCCACTTATAGGTGGCATGGGCGAGATGCCAAGACGGACAAGGAGCTGAATCCCAAGACACTGACCTCTGGGTTGGATGATTATCCACGCGCATCACACCCTTCGGATGATGAAAGACACGTGGATTTACGTTGCTGGATGTCATTTGCCGCTGGTTTGATGGCCGATATTGCTGAGGCTGTCAGTGAGAAATCTGATGCTGTGCTCTATAGGTCCACCAGTGACTATCTCTCTGACAACAAGCTGCTCGACAAGTATCATTGGTCGTCCAAGGCAGAATCATATAGTGATTATGGTAATCATACCAAGTTTGTAAAGCTTGTTCAACGTGCTATTCAACCCTCGCAACCAGGGAGTCCGAAGAAAACGGTTCGTATCGTGACTTCTAAACAAGGTCCATCTCTCAAGTTTGTGAATGCTCTCGGCTATGTCAGCCTGTTCCCCTTCCTGCTGCAAATCTTAGACCCTGCGTCTCCCAAGCTGGAAAAAGTCTTAAAGGATTTGAGAGATCCTGAACGGCTTTGGAGCGAATATGGATTAAGATCTTTATCACAAAGTAACTCCATCTATAAGACATACAACACTGAGCACGATGCGCCTTATTGGAGAGGAGCTATCTGGATCAACATCAACTACTTAGCAGTTAGAGCTCTGAATTATTACGCTAGTATTGCGGGGCCATATCAGAGCATGGCTAAAGAGATTTATACAGACTTACGCCTTAATTTAATTCGTAATATGTTGAGAGAGTACCAGAGAACGGGGTTTATATGGGAACAATACGATGACGTTACGGGACACGGGAAAGGGTCGCACCCATTTACGGGATGGTCTTCGCTTGTTGTTCTTATGATGTCAGAgcatttttaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80UM7	Mannosyl-oligosaccharide glucosidase OS=Mus musculus OX=10090 GN=Mogs PE=1 SV=1
F4HTM3	Mannosyl-oligosaccharide glucosidase GCS1 OS=Arabidopsis thaliana OX=3702 GN=GCS1 PE=1 SV=1
Q13724	Mannosyl-oligosaccharide glucosidase OS=Homo sapiens OX=9606 GN=MOGS PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008544 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16923 all species →	Glyco_hydro_63N	Glycosyl hydrolase family 63 N-terminal domain	Domain	Interproscan
PF03200 all species →	Glyco_hydro_63	Glycosyl hydrolase family 63 C-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038518 all species →	Homologous_superfamily	Glycosyl hydrolase family 63, N-terminal domain superfamily	Interproscan
IPR031631 all species →	Domain	Glycosyl hydrolase family 63, N-terminal	Interproscan
IPR004888 all species →	Family	Glycoside hydrolase family 63	Interproscan
IPR031335 all species →	Domain	Glycosyl hydrolase family 63, C-terminal	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10412 all species →	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004573 all species →	Molecular Function	Glc3Man9GlcNAc2 oligosaccharide glucosidase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0009311 all species →	Biological Process	oligosaccharide metabolic process	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01228	MOGS; mannosyl-oligosaccharide glucosidase	EC:3.2.1.106	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.