Detailed information of g1613.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002159293.1, SPRY domain-containing SOCS box protein 3 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5M9B1SPRY domain-containing SOCS box protein 3 OS=Xenopus laevis OX=8355 GN=spsb3 PE=2 SV=1
Q28DT9SPRY domain-containing SOCS box protein 3 OS=Xenopus tropicalis OX=8364 GN=spsb3 PE=2 SV=1
Q571F5SPRY domain-containing SOCS box protein 3 OS=Mus musculus OX=10090 GN=Spsb3 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF07959FucokinaseL-fucokinaseRepeatInterproscan
PF10151TMEM214TMEM214, C-terminal, caspase 4 activatorFamilyInterproscan
PF00622SPRYSPRY domainFamilyInterproscan
PF07525SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039477DomainILEI/PANDER domainInterproscan
IPR052463FamilyO-linked-mannose beta-1,2-N-acetylglucosaminyltransferaseInterproscan
IPR012887DomainL-fucokinaseInterproscan
IPR019308FamilyTransmembrane protein 214Interproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR039754FamilyPre-rRNA-processing protein Esf1Interproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR035754DomainSPRY domain-containing SOCS box protein 3, SPRY domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46396PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1Interproscan
PTHR15045FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASEInterproscan
PTHR13448TRANSMEMBRANE PROTEIN 214Interproscan
PTHR12202UNCHARACTERIZEDInterproscan
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016266Biological ProcessO-glycan processingInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0047223Molecular Functionbeta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10345SPSB3, SSB3; SPRY domain-containing SOCS box protein 3-Ubiquitin systemko04121deepkoala

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