Detailed information of g16161.t1 in Acropora digitifera

Genomic Location: chr7Alt:25092775...25102060
NR annotation: XP_029197067.2, uncharacterized protein LOC114962272 isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70513Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2
P70117Galectin-3-binding protein OS=Mesocricetus auratus OX=10036 GN=LGALS3BP PE=2 SV=1
Q2VL90Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa OX=9823 GN=CD163 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190
all species →		DomainSRCR domainInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR050686
all species →		FamilySRCR-S1 Scavenger ReceptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071
all species →		SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g16161.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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