Genomic Location: not available for this species
NR annotation: XP_026461517.1, protein-tyrosine sulfotransferase-like [Ctenocephalides felis]
Species Calvadosia cruxmelitensis · all data for this species · gene families
| UniProt accession | Description |
|---|---|
| A8XLL3 | Putative protein-tyrosine sulfotransferase OS=Caenorhabditis briggsae OX=6238 GN=tpst-2 PE=3 SV=2 |
| Q20351 | Putative protein-tyrosine sulfotransferase OS=Caenorhabditis elegans OX=6239 GN=tpst-2 PE=3 SV=2 |
| Q8IYE1 | Coiled-coil domain-containing protein 13 OS=Homo sapiens OX=9606 GN=CCDC13 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000001 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000012 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000109 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0000294 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0001204 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0002802 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0003009 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0004860 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0009912 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0010071 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0036961 (this species only) · gene tree & orthology |
| Orthogroup (gene family) | OG0062109 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00147 all species → | Fibrinogen_C | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | Interproscan |
| PF00155 all species → | Aminotran_1_2 | Aminotransferase class I and II | Domain | Interproscan |
| PF00001 all species → | 7tm_1 | 7 transmembrane receptor (rhodopsin family) | Family | Interproscan |
| PF13469 all species → | Sulfotransfer_3 | Sulfotransferase family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036056 all species → | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR050373 all species → | Family | Fibrinogen C-terminal domain-containing protein | Interproscan |
| IPR014716 all species → | Homologous_superfamily | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Interproscan |
| IPR002181 all species → | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR015421 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR004839 all species → | Domain | Aminotransferase, class I/classII | Interproscan |
| IPR051326 all species → | Family | Kynurenine--oxoglutarate transaminase | Interproscan |
| IPR015424 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR017452 all species → | Domain | GPCR, rhodopsin-like, 7TM | Interproscan |
| IPR000276 all species → | Family | G protein-coupled receptor, rhodopsin-like | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR026634 all species → | Family | Protein-tyrosine sulfotransferase-like | Interproscan |
| IPR038929 all species → | Family | Coiled-coil domain-containing protein 13 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19446 all species → | REVERSE TRANSCRIPTASES | Interproscan |
| PTHR19143 all species → | FIBRINOGEN/TENASCIN/ANGIOPOEITIN | Interproscan |
| PTHR43807 all species → | FI04487P | Interproscan |
| PTHR45695 all species → | LEUCOKININ RECEPTOR-RELATED | Interproscan |
| PTHR24248 all species → | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR | Interproscan |
| PTHR46704 all species → | CXC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| PTHR12788 all species → | PROTEIN-TYROSINE SULFOTRANSFERASE 2 | Interproscan |
| PTHR33244 all species → | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| PTHR33327 all species → | ENDONUCLEASE | Interproscan |
| PTHR31935 all species → | COILED-COIL DOMAIN-CONTAINING PROTEIN 13 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0062023 all species → | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| GO:0009058 all species → | Biological Process | biosynthetic process | Interproscan |
| GO:0030170 all species → | Molecular Function | pyridoxal phosphate binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0016212 all species → | Molecular Function | kynurenine-oxoglutarate transaminase activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0004930 all species → | Molecular Function | G protein-coupled receptor activity | Interproscan |
| GO:0007186 all species → | Biological Process | G protein-coupled receptor signaling pathway | Interproscan |
| GO:0005887 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0005794 all species → | Cellular Component | Golgi apparatus | Interproscan |
| GO:0006478 all species → | Biological Process | peptidyl-tyrosine sulfation | Interproscan |
| GO:0008146 all species → | Molecular Function | sulfotransferase activity | Interproscan |
| GO:0008476 all species → | Molecular Function | protein-tyrosine sulfotransferase activity | Interproscan |
| GO:0031122 all species → | Biological Process | cytoplasmic microtubule organization | Interproscan |
| GO:0034451 all species → | Cellular Component | centriolar satellite | Interproscan |
| GO:1905515 all species → | Biological Process | non-motile cilium assembly | Interproscan |
g162.t1.Genes whose expression across the transcriptome samples of Calvadosia cruxmelitensis tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Calvadosia cruxmelitensis, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | sequence table not available | – |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | sequence table not available | – |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
