Detailed information of g1622.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_044178433.1, uncharacterized protein LOC122947184 isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5G1Protocadherin gamma-B3 OS=Homo sapiens OX=9606 GN=PCDHGB3 PE=1 SV=4
Q5DRB9Protocadherin gamma-A12 OS=Pan troglodytes OX=9598 GN=PCDHGA12 PE=3 SV=1
Q5DRD4Protocadherin beta-18 OS=Pan troglodytes OX=9598 GN=PCDHB18 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01937ARMT1-like_domDamage-control phosphatase ARMT1-like domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF01227GTP_cyclohydroIGTP cyclohydrolase IDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003613DomainU-box domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR039763FamilyDamage-control phosphatase ARMT1Interproscan
IPR002791DomainDamage-control phosphatase ARMT1-like, metal-binding domainInterproscan
IPR036075Homologous_superfamilyDamage-control phosphatase ARMT1-like, metal-binding domain superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043133Homologous_superfamilyGTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductaseInterproscan
IPR043134Homologous_superfamilyGTP cyclohydrolase I, N-terminal domainInterproscan
IPR018234Conserved_siteGTP cyclohydrolase I, conserved siteInterproscan
IPR020602DomainGTP cyclohydrolase I domainInterproscan
IPR001474FamilyGTP cyclohydrolase IInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR12260UNCHARACTERIZEDInterproscan
PTHR11109GTP CYCLOHYDROLASE IInterproscan
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:2001020Biological Processobsolete regulation of response to DNA damage stimulusInterproscan
GO:0003934Molecular FunctionGTP cyclohydrolase I activityInterproscan
GO:0046654Biological Processtetrahydrofolate biosynthetic processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006729Biological Processtetrahydrobiopterin biosynthetic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23114ARMT1; damage-control phosphatase, subfamily IIIEC:3.1.3.-
Enzymes with EC numbers-deepkoala

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