Detailed information of g16375.t1 in Acropora digitifera

Genomic Location: chr7Alt:28494248...28497107
NR annotation: XP_015780454.1, PREDICTED: retinol dehydrogenase 8-like isoform X1 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P1406117-beta-hydroxysteroid dehydrogenase type 1 OS=Homo sapiens OX=9606 GN=HSD17B1 PE=1 SV=3
Q1WNP0Estradiol 17-beta-dehydrogenase 1 OS=Pan troglodytes OX=9598 GN=HSD17B1 PE=3 SV=3
P5165617-beta-hydroxysteroid dehydrogenase type 1 OS=Mus musculus OX=10090 GN=Hsd17b1 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43391
all species →		RETINOL DEHYDROGENASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g16375.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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