Gene detail

Detailed information of g16433.t1 in Acropora digitifera

Genomic Location: chr7Alt:29493401...29532046
NR annotation: XP_044164428.1, uncharacterized protein LOC122948536 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g16433.t1

ATGGCGGACCCTACTTCATCGCAGTACGACCAGGAATCGAACAAATGTCGATCAAAGCTCATCGAACATGCCGTAAGATGTCTCACCACGGAAAGGAGCACTTCGGTGTGTGTGAAACGAGATCATGTTAAACGAGTTTGGAAACAACTTCATGAATCTGGAAAAGCTGACAAATATTTCACAAAGAAAGAAAGACAGGAAATAGAGGACGGAATTGATGATTGGGAGCTTTTTCACGAGAGCCAAGTTCAAACAAGAAAGCCTTCTGACCTACGCGTGTGTTATCTTGGTGGTGATAACCCAATAAATGATCTCGAAGTCCTTGTTGCAAAGGGCGTTGTTTGCCAGAATGTATGGGCGATTGAAAAAGATGCGATCAAGAATTCCCAATTGAGAAATGTGAGACTATTCAAGGGCGACATTCTTACTTTCTTGAAAGATTTCCGAGGACAGTTTGACATCATTTACTTCGATGCCTTAAGTTCTCTTCCAGCAGCCAAACAGAAAACTCTGAAGATCATCGGCTATGTGTTTCTGTACAACAAGCTTACGTCGCCTGGTGCCTTGATTACCAACTTTTCTTTCCCATCTCAGGATACTCGGCAAGAGAATTCTGCAATTTCACAGGACGTATACGTAGATAAAGAGAGAGAAATGATAAATGTGCTGGTGAACGAGTATATGATGTGCAGAATGCGTAACGTCTTGGACGGAAACCGCTCGCCTAAAATGAAGGCAGAACATTTGAGTAAGAGGACAGATGAAGATAATTACGGAGACTACGTATCTTTTCAAGTTATCGATTCAGGCCATTTGTTTATTCCCGCTCAAAGAATGCTGTCGTCAAAAGGGAAATCACTGTGGGGTCAAATCTTTAGTTTCTCGCCAGAAGTGGAAAGCACAACCAAAGGCACCAATGAAAGAAGTACCAAAACAACAAGAAATCAAGAATTAATGGCATCACTGGAAGAGTTCAGTGATAAATATAATAGGTTTTTGCATCGAAGAAAAATGGCAGAAATTGACCTTGAGACGTCAAATTCCTATTTTGAAGCATTTGTTGCTGAAATCTTCCCAGATTTGAAATCTTTGCTAAGAGAAAAAAATTCTTCTGTGACTTCGACTCCCCTACCGCTTTCCTCTCCACGTTACATCATACAGTTTTGTAATGATTTATCAAAATGTCTTGTGCCGTTTTTGAAAGCTGATGTTGATGAAAGGATTTTGAAATGTTGCAATGTGGCAACTGCTGAACAGACAATCTGCCTTTTAGCTGATCTTCTTTATGGTCAAATGGCCTACCCATCATTTCCTGTTATGGATAAGCTGTTTCGTCTCAGGTACACTTCAGAGAAGAGGCAGATGTTTGGTGATGTTTTTATTTTTGACAAGTGCAGGTATCTGTATGATGAAGTCCCTTCTGTGGATTGTGTAGGCTTTGTTGAGCCAAAGCAGCAGATGGTGTTTAGAATGGTGGTGGATGGTTTACACAAGCACTTGGGAGGAATTTGTTCAGAAAATCTTTCCAAATTTTGCAGTGTTGCATGTACATATGCAATTAAGGAGGGAGGGGTGAGTTTTCCAAACAGTATGAGAAGCATTCCAAAGAGGCAGAAAATAGAAGATATACTCTTGAAAAAAAGAAAGCTTCCGGAGGAGGAGAACCCATATAGCTTTGCTACAACTGAAAGCCCTTGGGTAGTTACCAATGCTGATAAGTTACGCTATGATGCTGTTTTCAAGCAAGCTGATAAAGACAGAGATGGGCTTGTTTCTGGGGAAGATGTGAAGAGCACATTTATGGCCTCGGGTCTAGATGAGCAAATTCTTGCACACATTTGGGGCCTCTGCGATGTTACAAACCAAGGCCAGCTGAACTCTGAGCAGTTTGCGTTAGCCATGTATCTCATTCACCGAAAGGTCACGGGTGTGGATCCACCCCAGACACTCAGCCCTGAGATGGTGCCACCCTCTATGAGGACAAGCAGTGCTGGTACATTTGTGGCAGCAGGAGAGGCAACGGTCGTAATTTATGGTGGATGGGAGCAGGACTCAAAAGGGCAGGGGCTAGGAGATAAAACTATGAGAAGTGGGGCGGAAAGATACAAGAAGCAGGAAGTTTCAACCTCCCTGCGGGGAAAGATGAAAGCAAAGCACGACGTGATCAACCGCCCCGCAAGATCGCAACCTTTGGCAATAAAGTCTACGAGTTTATTTCATGGTAACGAGGAAGATTCAGATGAGATTGGAATGGAGAGGGCCACTCCTTTAATTTCTGGAGAAGGTTTACTTGATCAGAGAACTAGCATGATTGGGACGGCAACAGATTCAGATGACGAGGAAGTGCCGGGTAACGAGGAAGATTCAGATGAGATGATTGGAATGGAGAGGGCCACTCCTTTATGTTCTGAAGAAGTTGCACTTGATCAGGGAACTGGCATGATTGGGACGGCCACAGCTGCGTATGACGAGGAAGTGCTGTATAACGAGGAAGATTCAGATGAGATGATTGGAATGGAGAGGGCCACTCCTTTATTTTCTGAAGAAGTTGCACATGATCAGGGAACTGGCATGATTGGGACGGCCACAGTTGCAGATGACGAGGAAGTGCTGGGTAAGAAAGAGGACACAGACCAGATGGCCAGAATCGCAACCGTTGGAGAGAAAGTCCACGACGATATTCCAGTCCTTTATAGCAAACTGATATGCTGGGAAAAACAAAAGCAATGGCTAAAGTTCCTCCATGTGTTCACTTTCTTTTTAAAAACATTTAACGGCACAACATCAAGGCAATGTAACCTAACCTCTTGTACGCTGGATTACGGTGATGGCAGCCCCTGCAAGAAGACAAATGCTAAGCTCAGCAGACTTCTCATTGATGGTGGAACAATCAAAGGAGATCGTGGAACCGTGCGAGACAACAGAGTTGACACGAAGTTGCAAGAAGACGTGGAAGTTCAGATAGAAAACAGAGGAAATGAATGTCGCTCAAAGCTCATCGAACATGCCGTACGATGTCTCACCACGGAGAGGAGCACTTCCGTGTGTGTGAAACGAGATCATGTGGCACGAGTTTGGAGGCAACTTCATGAATCTGGGGAAGCTTACAAGTATTTCACAGAGGAAGATAGACGGGAAATAGAGGAGGAAATTGGTAATTGGGAGCTTTTGCACGACAGCAAGATGGAAAAAAAAAAGCCATCTGACCTACACGTGTGTTATCTTGGTGGTGATAACCCAATAAATGATCTCAAAGTCCTTGTTGCAAATGGCGTTCTTTGCCAGAATGTATGGGCAATTGAAAAAGATGCGATCAAGAATTCCCAATTGAGAAATGTAAGACTATTCAAGGGCGACATTCTTACTTTCTTGAGAGATTTCCAAGGAAAGTTTGACATCATTTACTTTGATGCCTATGGTACTCTTCCAGCAGCCAAACAGAACACTCTGAAGGTCATTGGCTATGTGTTTCTGTACGACAAACTTATTTCACCCGGGGCCTTGATTACCAACTTTTCTTTTCCTCCTCAGGAAGAGAACTCTGCAAGTTCACAGCACGTATGCATAGATAAAGAGAGAGAAATGATAAACTTCCTGGTAAAGGAGTATATGAAGTATAGACTGTGTAACGTCTTAGTCAACGACAACTCGCCAGAAAATAACCCAGAATATCTGAGTAAGAGATCAGATGAGGATAACTATGGAGACTACGTATCTTATCAAGTTATTGATTCAGCCTATTCGTTCATTCCCGCTCAAAGAATGCTGTTGTCAAAATCACTATGGGATCAAATCTTTGTTGACAAACAGGTTTTTCTCCAGGACATACACAGCTATTTCTCGTCAGATGGGGAAAATGCAACCAAAGCAACCAAAGAAAAAAGTACCAAAACAACAAAGTCTGAAAACCTAGCAGCAGAACGGGAAGAGTTGAAGAATTTGAAAGCATTTGAAGTTGATGCGACAGAAAGACTTTTTCTCTACCGAAAGAAAATGGTGGAAAATTTAATTTTCCATGAGCAATCAAATTCTTTGTGTAAAGCTTGGGTTGCTGAAATCTTCCCAGATTGGAGAGCAAAGTCATCTTTGAAAAAGGAAAAACTTCCTTCTATGCTTTTGACTCCTATACTGTCTTCCTCTCGAACTCACATTCTACAGTTTTCTAATGATGATTCGACATCAAAATGTCTTGGGCCACTTTTAAAGGCTATTGATGAAAAAAGGGTCCCAAGTTGTTGCGATTTGGCGTCTGAAGGAGAGGCAACATGCCTTGTAAGTGGCCTTTATGGTCAAATGGCCTTCCCATCATTTCCTGTCATGGATAAGCTGTTTCGTCTCAGATACACTGCAAAGAAGAGGCAGATGTTTGCTGATGTTTTTGTTTTTGACAAGTGCAGGTATCTGTATGATGAAGTCCCATCTGTGGATTGTGTAGGCTTTGTTGAGCCAAAGCAGCAGATGGTGTTTAGAATGGTGGTGGATGGTTTGTGCAAGCACCTGGGAGGAATTTGTTGCAAAGATGTTTTCCATCATTGCAATGTTGCAAGTATAAATGAGATTATGGCAGGAGGAGTGAGTTTTCCAAACAGTCATAAAAGCATTCCTAACAGGTAG

Transcript

chr7Alt.g16433.t1

GGAATAGTGGTCGTGTGAGTTCGTCATGGCGGACCCTACTTCATCGCAGTACGACCAGGAATCGAACAAATGTCGATCAAAGCTCATCGAACATGCCGTAAGATGTCTCACCACGGAAAGGAGCACTTCGGTGTGTGTGAAACGAGATCATGTTAAACGAGTTTGGAAACAACTTCATGAATCTGGAAAAGCTGACAAATATTTCACAAAGAAAGAAAGACAGGAAATAGAGGACGGAATTGATGATTGGGAGCTTTTTCACGAGAGCCAAGTTCAAACAAGAAAGCCTTCTGACCTACGCGTGTGTTATCTTGGTGGTGATAACCCAATAAATGATCTCGAAGTCCTTGTTGCAAAGGGCGTTGTTTGCCAGAATGTATGGGCGATTGAAAAAGATGCGATCAAGAATTCCCAATTGAGAAATGTGAGACTATTCAAGGGCGACATTCTTACTTTCTTGAAAGATTTCCGAGGACAGTTTGACATCATTTACTTCGATGCCTTAAGTTCTCTTCCAGCAGCCAAACAGAAAACTCTGAAGATCATCGGCTATGTGTTTCTGTACAACAAGCTTACGTCGCCTGGTGCCTTGATTACCAACTTTTCTTTCCCATCTCAGGATACTCGGCAAGAGAATTCTGCAATTTCACAGGACGTATACGTAGATAAAGAGAGAGAAATGATAAATGTGCTGGTGAACGAGTATATGATGTGCAGAATGCGTAACGTCTTGGACGGAAACCGCTCGCCTAAAATGAAGGCAGAACATTTGAGTAAGAGGACAGATGAAGATAATTACGGAGACTACGTATCTTTTCAAGTTATCGATTCAGGCCATTTGTTTATTCCCGCTCAAAGAATGCTGTCGTCAAAAGGGAAATCACTGTGGGGTCAAATCTTTAGTTTCTCGCCAGAAGTGGAAAGCACAACCAAAGGCACCAATGAAAGAAGTACCAAAACAACAAGAAATCAAGAATTAATGGCATCACTGGAAGAGTTCAGTGATAAATATAATAGGTTTTTGCATCGAAGAAAAATGGCAGAAATTGACCTTGAGACGTCAAATTCCTATTTTGAAGCATTTGTTGCTGAAATCTTCCCAGATTTGAAATCTTTGCTAAGAGAAAAAAATTCTTCTGTGACTTCGACTCCCCTACCGCTTTCCTCTCCACGTTACATCATACAGTTTTGTAATGATTTATCAAAATGTCTTGTGCCGTTTTTGAAAGCTGATGTTGATGAAAGGATTTTGAAATGTTGCAATGTGGCAACTGCTGAACAGACAATCTGCCTTTTAGCTGATCTTCTTTATGGTCAAATGGCCTACCCATCATTTCCTGTTATGGATAAGCTGTTTCGTCTCAGGTACACTTCAGAGAAGAGGCAGATGTTTGGTGATGTTTTTATTTTTGACAAGTGCAGGTATCTGTATGATGAAGTCCCTTCTGTGGATTGTGTAGGCTTTGTTGAGCCAAAGCAGCAGATGGTGTTTAGAATGGTGGTGGATGGTTTACACAAGCACTTGGGAGGAATTTGTTCAGAAAATCTTTCCAAATTTTGCAGTGTTGCATGTACATATGCAATTAAGGAGGGAGGGGTGAGTTTTCCAAACAGTATGAGAAGCATTCCAAAGAGGCAGAAAATAGAAGATATACTCTTGAAAAAAAGAAAGCTTCCGGAGGAGGAGAACCCATATAGCTTTGCTACAACTGAAAGCCCTTGGGTAGTTACCAATGCTGATAAGTTACGCTATGATGCTGTTTTCAAGCAAGCTGATAAAGACAGAGATGGGCTTGTTTCTGGGGAAGATGTGAAGAGCACATTTATGGCCTCGGGTCTAGATGAGCAAATTCTTGCACACATTTGGGGCCTCTGCGATGTTACAAACCAAGGCCAGCTGAACTCTGAGCAGTTTGCGTTAGCCATGTATCTCATTCACCGAAAGGTCACGGGTGTGGATCCACCCCAGACACTCAGCCCTGAGATGGTGCCACCCTCTATGAGGACAAGCAGTGCTGGTACATTTGTGGCAGCAGGAGAGGCAACGGTCGTAATTTATGGTGGATGGGAGCAGGACTCAAAAGGGCAGGGGCTAGGAGATAAAACTATGAGAAGTGGGGCGGAAAGATACAAGAAGCAGGAAGTTTCAACCTCCCTGCGGGGAAAGATGAAAGCAAAGCACGACGTGATCAACCGCCCCGCAAGATCGCAACCTTTGGCAATAAAGTCTACGAGTTTATTTCATGGTAACGAGGAAGATTCAGATGAGATTGGAATGGAGAGGGCCACTCCTTTAATTTCTGGAGAAGGTTTACTTGATCAGAGAACTAGCATGATTGGGACGGCAACAGATTCAGATGACGAGGAAGTGCCGGGTAACGAGGAAGATTCAGATGAGATGATTGGAATGGAGAGGGCCACTCCTTTATGTTCTGAAGAAGTTGCACTTGATCAGGGAACTGGCATGATTGGGACGGCCACAGCTGCGTATGACGAGGAAGTGCTGTATAACGAGGAAGATTCAGATGAGATGATTGGAATGGAGAGGGCCACTCCTTTATTTTCTGAAGAAGTTGCACATGATCAGGGAACTGGCATGATTGGGACGGCCACAGTTGCAGATGACGAGGAAGTGCTGGGTAAGAAAGAGGACACAGACCAGATGGCCAGAATCGCAACCGTTGGAGAGAAAGTCCACGACGATATTCCAGTCCTTTATAGCAAACTGATATGCTGGGAAAAACAAAAGCAATGGCTAAAGTTCCTCCATGTGTTCACTTTCTTTTTAAAAACATTTAACGGCACAACATCAAGGCAATGTAACCTAACCTCTTGTACGCTGGATTACGGTGATGGCAGCCCCTGCAAGAAGACAAATGCTAAGCTCAGCAGACTTCTCATTGATGGTGGAACAATCAAAGGAGATCGTGGAACCGTGCGAGACAACAGAGTTGACACGAAGTTGCAAGAAGACGTGGAAGTTCAGATAGAAAACAGAGGAAATGAATGTCGCTCAAAGCTCATCGAACATGCCGTACGATGTCTCACCACGGAGAGGAGCACTTCCGTGTGTGTGAAACGAGATCATGTGGCACGAGTTTGGAGGCAACTTCATGAATCTGGGGAAGCTTACAAGTATTTCACAGAGGAAGATAGACGGGAAATAGAGGAGGAAATTGGTAATTGGGAGCTTTTGCACGACAGCAAGATGGAAAAAAAAAAGCCATCTGACCTACACGTGTGTTATCTTGGTGGTGATAACCCAATAAATGATCTCAAAGTCCTTGTTGCAAATGGCGTTCTTTGCCAGAATGTATGGGCAATTGAAAAAGATGCGATCAAGAATTCCCAATTGAGAAATGTAAGACTATTCAAGGGCGACATTCTTACTTTCTTGAGAGATTTCCAAGGAAAGTTTGACATCATTTACTTTGATGCCTATGGTACTCTTCCAGCAGCCAAACAGAACACTCTGAAGGTCATTGGCTATGTGTTTCTGTACGACAAACTTATTTCACCCGGGGCCTTGATTACCAACTTTTCTTTTCCTCCTCAGGAAGAGAACTCTGCAAGTTCACAGCACGTATGCATAGATAAAGAGAGAGAAATGATAAACTTCCTGGTAAAGGAGTATATGAAGTATAGACTGTGTAACGTCTTAGTCAACGACAACTCGCCAGAAAATAACCCAGAATATCTGAGTAAGAGATCAGATGAGGATAACTATGGAGACTACGTATCTTATCAAGTTATTGATTCAGCCTATTCGTTCATTCCCGCTCAAAGAATGCTGTTGTCAAAATCACTATGGGATCAAATCTTTGTTGACAAACAGGTTTTTCTCCAGGACATACACAGCTATTTCTCGTCAGATGGGGAAAATGCAACCAAAGCAACCAAAGAAAAAAGTACCAAAACAACAAAGTCTGAAAACCTAGCAGCAGAACGGGAAGAGTTGAAGAATTTGAAAGCATTTGAAGTTGATGCGACAGAAAGACTTTTTCTCTACCGAAAGAAAATGGTGGAAAATTTAATTTTCCATGAGCAATCAAATTCTTTGTGTAAAGCTTGGGTTGCTGAAATCTTCCCAGATTGGAGAGCAAAGTCATCTTTGAAAAAGGAAAAACTTCCTTCTATGCTTTTGACTCCTATACTGTCTTCCTCTCGAACTCACATTCTACAGTTTTCTAATGATGATTCGACATCAAAATGTCTTGGGCCACTTTTAAAGGCTATTGATGAAAAAAGGGTCCCAAGTTGTTGCGATTTGGCGTCTGAAGGAGAGGCAACATGCCTTGTAAGTGGCCTTTATGGTCAAATGGCCTTCCCATCATTTCCTGTCATGGATAAGCTGTTTCGTCTCAGATACACTGCAAAGAAGAGGCAGATGTTTGCTGATGTTTTTGTTTTTGACAAGTGCAGGTATCTGTATGATGAAGTCCCATCTGTGGATTGTGTAGGCTTTGTTGAGCCAAAGCAGCAGATGGTGTTTAGAATGGTGGTGGATGGTTTGTGCAAGCACCTGGGAGGAATTTGTTGCAAAGATGTTTTCCATCATTGCAATGTTGCAAGTATAAATGAGATTATGGCAGGAGGAGTGAGTTTTCCAAACAGTCATAAAAGCATTCCTAACAGGTAGGAAATAAAACAATTTATACTGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q60902	Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3
Q9UBC2	Epidermal growth factor receptor substrate 15-like 1 OS=Homo sapiens OX=9606 GN=EPS15L1 PE=1 SV=1
P42567	Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000261 all species →	Domain	EH domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216 all species →	EH DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0030132 all species →	Cellular Component	clathrin coat of coated pit	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g16433.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.