Gene detail

Detailed information of g16484.t1 in Acropora digitifera

Genomic Location: chr7Alt:30046069...30049880
NR annotation: XP_015775458.1, PREDICTED: phosphoglycerate kinase 1-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr7Alt.g16484.t1

CCGCAAGTGCCCGAGGTATTTTCGGGATGGCAAAGAAACGGGAGAGCCTCGGTACGATTACTTTTCAACGGTGGATCACGGGTGTTGGGAGTCAAGAGTGCGTTCTGTAAACTTTTCTTGTGGCCTGTTTCGTGTTGGAAGTCATGTCCTTTAACAAATTATCCCTCGCTTCTGTGGATTGCAAAGGAAAGCGTGTTTTGATGCGCGTTGACTTCAATGTGCCTCTTAAAGGAAAAGAAATCACCAACAACCAACGCATTGTAGCAGCCTTACAGAGTATTCGATATTGTTTGGATAATGGCGCTCAGAGCGTGGTGTTAATGAGTCACTTAGGACGACCAGATGGTAGAGTTGCCGAGAAATATTCCTTAGCACCAGTAGTCGATGAACTAAAGAAGCTCTTGGACAAGGACGTCACATTCCTGCCTGACTGTGTGGGTGAAAAAGTCGAAGAGGCGTGCAAAGATCCAAAGCTTGGTTCTGTGATTTTGCTGGAAAACCTACGTTTTCATGTTGAAGAAGAAGGAAAAGGCGTTGACAGTGATGGCAACAAGGTGAAAGCAAGTAAAGAGGCTGTTGGCAAGTTCTGCGAATCCCTGGCGAAGCTAGGAGACATTTATGTCAATGATGCCTTTGGGACAGCTCATAGAGCTCATGGTTCTATGGTTGGAGTCAATTTGCCAATTAAGGCTGCAGGATTTCTTATGCAGAAGGAATTGGTGTATTTCTCAAAGGCAATGGAGAAGCCAGATCGTCCATACCTGGCAATCTTAGGAGGAGCTAAAGTCGCAGACAAGATTTTACTCATTGAGAACCTTCTGGATAAAGTCAATGACATGATTATTGGTGGTGGAATGGCATATACATTTGTGAAAGTACTGCATGGCATGGAGATTGGCAAATCACTCTTTGATGAAGCAGGTTCCAAGATCATTAACAAGATCTGTGACAAGGCTAAAGAGAAGGGAGTCAACCTTCATTTTCCCATGGATTTTGTTGCTGCTAGCAAATTTGCAGAGGATGCAGAGACCGCCAGTGCGACGATTGAGTCTGGGATACCTGTGGACTGGATGGGCTTGGATATAGGGCCACAGAGTCTGAAGAAATTCCAAGAAGTGGTGATGCAAGCAAAAACCATTATCTGGAATGGTCCCATGGGTGTGTTTGAAATGTCCAAATTTGAAGTTGGCACCAAAGGTATCATGGATGCCGTCGTTGCAGCGACAAAGAATGGCACAGTTTCCATTATTGGTGGAGGTGATACAGCGACCTGCTGTGTAAAGTACGGAACAGAGGAACTGGTCAGCCACGTCAGTACAGGCGGTGGAGCCTCATTGGAGCTACTTGAAGGAAAAACTCTCCCTGGAGTGGCTGCTTTGTCTGATGCTTGACTAGGCCTTTCTCATTTATGACTACAATTAATTATTCTCTGTGATTTAGTCAGTAGGTGATTAGCATAAGTGTCAATAATAATTAAAAAAACAATGGTGTAAGGTAAATAATACAACTAGTTTTTGGAAGATTTTCCTTCAAATACTTAAGTATTGCAGTTAGTTCTTCTTACATGTGTGTGAAATCACATCTTAGATGTGATTTCACCATGGCATGGTTAAAATAAAAGCAATGATGCAAATGAGATATTACGTGAAAATTAACATGGGAGCTGAATAGGCAAGTTCTAAAGCTACAGTAGAACCAGTTTTGAAGAAAACGTAGCATTTATTAGGTTGAAGTTCCTACCATTTTACTGGTACTATTTTTTATGATCACTTGGCTCAGTGTGAGTGAGTGGTTGTCAAAGAAGATATCAAGTACAATGAGCATGCACCAGAATAGACCCCCTTATGTTTTCTCTCTTTTAGCAAATATGTTTTTTGCAACTGGTGGAGCCTTTTGGCATGTCACTCGCATAATGGAAAATTAGTAATATTCCAGTTACTGACACTATACTTTTGAATTGAATTTTCTGCAAATGACTTGACTAATCTGTCATAGCAAGTGTAAATTATTTCTCTTCCCCTGGACAGATTTATATTTAATGCAAATAATTTGTTATTTGATCTGTTTTGAATGTGATTGGATTTTATTCCTGTGTATGTAAATTCGTCTGGACATGGCATACAATATTTCTGTTCTACAAGTTGGTCAGCCTAGTAAACCTATTGAACTATCCAATGAGGTTGAAATGTTCTTGTTATTTTGAGTTTATCTTCTTTTGTGAGAGGGAAAGAGGTGTAATATACCTATGGAAATGGTTCATTAGTTAAGGTAACAAGGTTGTGTTGTCTAATATCAGTCCTTCATCTTGCTGATGAAGGCCTTGCTTATTGAGCCAAACAATAAGCTGTAGCTTGGAACTTGTTGTGGGAAGTGAAAGAATGAGGACGATAAATGAGAATTTAGTCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3T0P6	Phosphoglycerate kinase 1 OS=Bos taurus OX=9913 GN=PGK1 PE=2 SV=3
Q60HD8	Phosphoglycerate kinase 1 OS=Macaca fascicularis OX=9541 GN=PGK1 PE=2 SV=3
Q5NVB5	Phosphoglycerate kinase 1 OS=Pongo abelii OX=9601 GN=PGK1 PE=2 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00162 all species →	PGK	Phosphoglycerate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015824 all species →	Homologous_superfamily	Phosphoglycerate kinase, N-terminal	Interproscan
IPR001576 all species →	Family	Phosphoglycerate kinase	Interproscan
IPR036043 all species →	Homologous_superfamily	Phosphoglycerate kinase superfamily	Interproscan
IPR015911 all species →	Conserved_site	Phosphoglycerate kinase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11406 all species →	PHOSPHOGLYCERATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004618 all species →	Molecular Function	phosphoglycerate kinase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0043531 all species →	Molecular Function	ADP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00927	PGK, pgk; phosphoglycerate kinase	EC:2.7.2.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.