Detailed information of g165.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAI0210204.1, Macrophage migration inhibitory factor [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P53808Phosphatidylcholine transfer protein OS=Mus musculus OX=10090 GN=Pctp PE=1 SV=2
P53809Phosphatidylcholine transfer protein OS=Rattus norvegicus OX=10116 GN=Pctp PE=2 SV=2
P02720Phosphatidylcholine transfer protein OS=Bos taurus OX=9913 GN=PCTP PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyGCFC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14929TAF1_subATAF RNA Polymerase I subunit ARepeatInterproscan
PF01852STARTSTART domainDomainInterproscan
PF01191RNA_pol_Rpb5_CRNA polymerase Rpb5, C-terminal domainDomainInterproscan
PF01187MIFMacrophage migration inhibitory factor (MIF)DomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF15458NTR2Nineteen complex-related protein 2FamilyInterproscan
PF07842GCFCGC-rich sequence DNA-binding factor-like proteinFamilyInterproscan
PF06079ApyraseApyraseRepeatInterproscan
PF00856SETSET domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052669FamilySL1/TIF-IB Complex ComponentInterproscan
IPR039495FamilyTATA box-binding protein-associated factor RNA polymerase I subunit AInterproscan
IPR002913DomainSTART domainInterproscan
IPR023393Homologous_superfamilySTART-like domain superfamilyInterproscan
IPR051213FamilySTART domain-containing lipid transferInterproscan
IPR000783DomainRNA polymerase, subunit H/Rpb5 C-terminalInterproscan
IPR036710Homologous_superfamilyRNA polymerase Rpb5, N-terminal domain superfamilyInterproscan
IPR035913Homologous_superfamilyRPB5-like RNA polymerase subunit superfamilyInterproscan
IPR014381FamilyDNA-directed RNA polymerase subunit Rpo5/Rpb5Interproscan
IPR014347Homologous_superfamilyTautomerase/MIF superfamilyInterproscan
IPR001398FamilyMacrophage migration inhibitory factorInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR050122FamilyReceptor Tyrosine KinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012890FamilyIntron Large complex component GCFC2-likeInterproscan
IPR028211FamilyPre-mRNA-splicing factor Ntr2Interproscan
IPR022783DomainGCF, C-terminalInterproscan
IPR009283FamilyApyraseInterproscan
IPR036258Homologous_superfamilyApyrase superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR053201FamilyFlavunoidine biosynthesis N-methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32122TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT AInterproscan
PTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINInterproscan
PTHR10535DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1Interproscan
PTHR11954D-DOPACHROME DECARBOXYLASEInterproscan
PTHR24416TYROSINE-PROTEIN KINASE RECEPTORInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR12214GC-RICH SEQUENCE DNA-BINDING FACTORInterproscan
PTHR13023APYRASEInterproscan
PTHR12350HISTONE-LYSINE N-METHYLTRANSFERASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000120Cellular ComponentRNA polymerase I transcription regulator complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0008525Molecular Functionphosphatidylcholine transporter activityInterproscan
GO:0031210Molecular Functionphosphatidylcholine bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0050178Molecular Functionphenylpyruvate tautomerase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0001889Biological Processliver developmentInterproscan
GO:0004714Molecular Functiontransmembrane receptor protein tyrosine kinase activityInterproscan
GO:0005008Molecular Functionhepatocyte growth factor receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0009925Cellular Componentbasal plasma membraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0031016Biological Processpancreas developmentInterproscan
GO:0033674Biological Processpositive regulation of kinase activityInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000390Biological Processspliceosomal complex disassemblyInterproscan
GO:0071008Cellular ComponentU2-type post-mRNA release spliceosomal complexInterproscan
GO:0004382Molecular FunctionGDP phosphatase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0017110Molecular Functionnucleoside diphosphate phosphatase activityInterproscan
GO:0030166Biological Processproteoglycan biosynthetic processInterproscan
GO:0045134Molecular FunctionUDP phosphatase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12304CANT1; soluble calcium-activated nucleotidase 1EC:3.6.1.6
Exosomeko04147deepkoala
Spliceosomeko03041deepkoala
Pyrimidine metabolismko00240deepkoala

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