Detailed information of g1652.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAG7822384.1, unnamed protein product [Allacma fusca]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P14057Nuclear factor 1 (Fragment) OS=Sus scrofa OX=9823 GN=NFI PE=1 SV=1
P70255Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1
P21999Nuclear factor 1 C-type OS=Sus scrofa OX=9823 GN=NFIC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02377DishevelledDishevelled specific domainFamilyInterproscan
PF00778DIXDIX domainFamilyInterproscan
PF00610DEPDomain found in Dishevelled, Egl-10, and Pleckstrin (DEP)DomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF10524NfI_DNAbd_pre-NNuclear factor I protein pre-N-terminusFamilyInterproscan
PF01582TIRTIR domainFamilyInterproscan
PF02735KuKu70/Ku80 beta-barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003351DomainDishevelled protein domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR000591DomainDEP domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR008339FamilyDishevelled familyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001158DomainDIX domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR015506FamilyDishevelled-related proteinInterproscan
IPR038207Homologous_superfamilyDIX domain superfamilyInterproscan
IPR019548DomainCTF transcription factor/nuclear factor 1, N-terminalInterproscan
IPR020604DomainCTF transcription factor/nuclear factor 1, DNA-binding domainInterproscan
IPR000647FamilyCTF transcription factor/nuclear factor 1Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR006164DomainKu70/Ku80 beta-barrel domainInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10878SEGMENT POLARITY PROTEIN DISHEVELLEDInterproscan
PTHR11492NUCLEAR FACTOR IInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47508SAM DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0005109Molecular Functionfrizzled bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02353DVL; segment polarity protein dishevelled-Cushing syndromeko04934deepkoala

TOP