Detailed information of g16541.t1 in Acropora digitifera

Genomic Location: chr7Alt:31043096...31060780
NR annotation: XP_029204378.2, leucine-rich repeat-containing protein 40-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZLN0Leucine-rich repeat-containing protein 40 OS=Gallus gallus OX=9031 GN=LRRC40 PE=2 SV=1
Q7SXW3Leucine-rich repeat-containing protein 40 OS=Danio rerio OX=7955 GN=lrrc40 PE=2 SV=1
Q5RFE9Leucine-rich repeat-containing protein 40 OS=Pongo abelii OX=9601 GN=LRRC40 PE=2 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF12799
all species →		LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050216
all species →		FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR025875
all species →		RepeatLeucine rich repeat 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g16541.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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