Gene detail

Detailed information of g1656.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004210545.1, uncharacterized protein LOC100202164 isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96NC0	Zinc finger matrin-type protein 2 OS=Homo sapiens OX=9606 GN=ZMAT2 PE=1 SV=1
Q9CPW7	Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1
P34670	Putative zinc finger matrin-type protein snu-23 OS=Caenorhabditis elegans OX=6239 GN=snu-23 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04665	Pox_A32	Poxvirus A32 protein	Domain	Interproscan
PF17819	Tex55	Testis-specific expressed protein 55	Family	Interproscan
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF19745	FUT8_N_cat	Alpha-(1,6)-fucosyltransferase N- and catalytic domains	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006758	Family	Poxvirus A32	Interproscan
IPR040760	Family	Testis-specific expressed protein 55	Interproscan
IPR000690	Domain	Matrin/U1-C, C2H2-type zinc finger	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR040107	Family	U4/U6.U5 small nuclear ribonucleoprotein component Snu23	Interproscan
IPR045573	Domain	Alpha-(1,6)-fucosyltransferase, N- and catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45986	ZINC FINGER MATRIN-TYPE PROTEIN 2	Interproscan
PTHR13132	ALPHA- 1,6 -FUCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan
GO:0006487	Biological Process	protein N-linked glycosylation	Interproscan
GO:0036071	Biological Process	N-glycan fucosylation	Interproscan
GO:0046921	Molecular Function	alpha-(1->6)-fucosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12848	SNU23; U4/U6.U5 tri-snRNP component SNU23	-	Spliceosome	ko03041	deepkoala