Detailed information of g16614.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_002156165.1, ATP-dependent RNA helicase HAS1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K363ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1
Q9NVP1ATP-dependent RNA helicase DDX18 OS=Homo sapiens OX=9606 GN=DDX18 PE=1 SV=2
Q6CXB7ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=HAS1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13959DUF4217Domain of unknown function (DUF4217)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR044773DomainDDX18/Has1, DEAD-box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR025313DomainDomain of unknown function DUF4217Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24031RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13179DDX18, HAS1; ATP-dependent RNA helicase DDX18/HAS1EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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