Detailed information of g16636.t1.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015777088.1, PREDICTED: splicing factor 3B subunit 3-like [Acropora digitifera]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
No sequence record for g16636.t1.1 in MCACT (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LVE8Splicing factor 3B subunit 3 OS=Danio rerio OX=7955 GN=sf3b3 PE=2 SV=1
A0JN52Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1
Q15393Splicing factor 3B subunit 3 OS=Homo sapiens OX=9606 GN=SF3B3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004170 (this species only)

 Pfam domain
No Pfam domain signature was detected for g16636.t1.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050358
all species →
FamilyRSE1/DDB1/CFT1/CPSF1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644
all species →
DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005686
all species →
Cellular ComponentU2 snRNPInterproscan
GO:0030620
all species →
Molecular FunctionU2 snRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g16636.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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