Detailed information of g16648.t1 in Acropora digitifera

Genomic Location: chr7Alt:32381309...32411666
NR annotation: XP_044164160.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114963076 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P04114Apolipoprotein B-100 OS=Homo sapiens OX=9606 GN=APOB PE=1 SV=3
E9Q414Apolipoprotein B-100 OS=Mus musculus OX=10090 GN=Apob PE=1 SV=1
Q6RG02Vitellogenin OS=Penaeus merguiensis OX=71412 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01347
all species →
Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan
PF06448
all species →
DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF09172
all species →
Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR015819
all species →
Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR001747
all species →
DomainVitellogenin, N-terminalInterproscan
IPR015817
all species →
Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015255
all species →
DomainVitellinogen, open beta-sheetInterproscan
IPR009454
all species →
DomainLipid transport, open beta-sheetInterproscan
IPR011030
all species →
Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015816
all species →
Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR050733
all species →
FamilyVitellogenin/ApolipophorinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345
all species →
VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →
Molecular Functionlipid transporter activityInterproscan
GO:0006869
all species →
Biological Processlipid transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g16648.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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