Gene detail

Detailed information of g167.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047142710.1, uncharacterized protein LOC100211734 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D358	Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3
P41498	Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3
P24666	Low molecular weight phosphotyrosine protein phosphatase OS=Homo sapiens OX=9606 GN=ACP1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000043 (this species only)
Orthogroup (gene family)	OG0000428 (this species only)
Orthogroup (gene family)	OG0002214 (this species only)
Orthogroup (gene family)	OG0005396 (this species only)
Orthogroup (gene family)	OG0008935 (this species only)
Orthogroup (gene family)	OG0009421 (this species only)
Orthogroup (gene family)	OG0009609 (this species only)
Orthogroup (gene family)	OG0011847 (this species only)
Orthogroup (gene family)	OG0036036 (this species only)
Orthogroup (gene family)	OG0036189 (this species only)
Orthogroup (gene family)	OG0080400 (this species only)
Orthogroup (gene family)	OG0173465 (this species only)
Orthogroup (gene family)	OG0173862 (this species only)
Transcription factor family	bHLH · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00155 all species →	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF20700 all species →	Mutator	Mutator-like transposase	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF05071 all species →	NDUFA12	NADH ubiquinone oxidoreductase subunit NDUFA12	Family	Interproscan
PF01451 all species →	LMWPc	Low molecular weight phosphotyrosine protein phosphatase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR005861 all species →	Family	Histidinol-phosphate aminotransferase family	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR004839 all species →	Domain	Aminotransferase, class I/classII	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR049012 all species →	Domain	Mutator-like transposase domain	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR024862 all species →	Family	Transient receptor potential cation channel subfamily V	Interproscan
IPR007763 all species →	Family	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	Interproscan
IPR052618 all species →	Family	Complex I NDUFA12 subunit	Interproscan
IPR023485 all species →	Domain	Phosphotyrosine protein phosphatase I	Interproscan
IPR002115 all species →	Family	Protein-tyrosine phosphatase, low molecular weight, mammalian	Interproscan
IPR050438 all species →	Family	Low Molecular Weight Phosphotyrosine Protein Phosphatase	Interproscan
IPR017867 all species →	Family	Protein-tyrosine phosphatase, low molecular weight	Interproscan
IPR036196 all species →	Homologous_superfamily	Phosphotyrosine protein phosphatase I superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR002418 all species →	Family	Transcription regulator Myc	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR050433 all species →	Family	Myc family transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR42885 all species →	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED	Interproscan
PTHR10582 all species →	TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN	Interproscan
PTHR32470 all species →	ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2	Interproscan
PTHR11717 all species →	LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR45851 all species →	MYC PROTO-ONCOGENE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000105 all species →	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0004400 all species →	Molecular Function	histidinol-phosphate transaminase activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005262 all species →	Molecular Function	calcium channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0098703 all species →	Biological Process	calcium ion import across plasma membrane	Interproscan
GO:0032981 all species →	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0003993 all species →	Molecular Function	acid phosphatase activity	Interproscan
GO:0004726 all species →	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00817	hisC; histidinol-phosphate aminotransferase	EC:2.6.1.9	Amino acid related enzymes	ko01007	deepkoala
K04377	MYC; Myc proto-oncogene protein	-	Messenger RNA biogenesis	ko03019	deepkoala
K14394	ACP1; low molecular weight phosphotyrosine protein phosphatase	EC:3.1.3.2 EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.