Detailed information of g1670.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047146280.1, uncharacterized protein LOC124819114 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2
Q92752Tenascin-R OS=Homo sapiens OX=9606 GN=TNR PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF08585RMI1_N_CRMI1, N-terminal OB-fold domainDomainInterproscan
PF21000RMI1_N_NRMI1, N-terminal helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR037624FamilyNuclear pore complex protein Nup133-likeInterproscan
IPR013894DomainRecQ mediated genome instability protein 1, OB-fold domainInterproscan
IPR044881Homologous_superfamilyRecQ-mediated genome instability protein 1, N-terminal helical domain superfamilyInterproscan
IPR049363DomainRMI1, N-terminal domainInterproscan
IPR042470Homologous_superfamilyRecQ mediated genome instability protein, N-terminal OB-fold domain superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR13405NUCLEAR PORE COMPLEX PROTEIN NUP133Interproscan
PTHR47481-Interproscan
PTHR14790RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0000972Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan
GO:0031422Cellular ComponentRecQ family helicase-topoisomerase III complexInterproscan

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