Gene detail

Detailed information of g1682.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_027050214.1, H/ACA ribonucleoprotein complex subunit 2-like protein [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6PBV6	H/ACA ribonucleoprotein complex subunit 2-like protein OS=Danio rerio OX=7955 GN=nhp2 PE=2 SV=1
Q6XIP0	H/ACA ribonucleoprotein complex subunit 2-like protein OS=Drosophila yakuba OX=7245 GN=NHP2 PE=2 SV=1
Q9V3U2	H/ACA ribonucleoprotein complex subunit 2 OS=Drosophila melanogaster OX=7227 GN=NHP2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00995	Sec1	Sec1 family	Family	Interproscan
PF04065	Not3	Not1 N-terminal domain, CCR4-Not complex component	Family	Interproscan
PF02816	Alpha_kinase	Alpha-kinase family	Family	Interproscan
PF01248	Ribosomal_L7Ae	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036045	Homologous_superfamily	Sec1-like superfamily	Interproscan
IPR027482	Homologous_superfamily	Sec1-like, domain 2	Interproscan
IPR001619	Family	Sec1-like protein	Interproscan
IPR007207	Domain	CCR4-Not complex component, Not N-terminal domain	Interproscan
IPR000727	Domain	Target SNARE coiled-coil homology domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR004166	Domain	Alpha-type protein kinase, alpha-kinase domain	Interproscan
IPR029064	Homologous_superfamily	Ribosomal protein eL30-like superfamily	Interproscan
IPR018492	Family	Ribosomal protein eL8/Nhp2 family	Interproscan
IPR050257	Family	Eukaryotic ribosomal RNA-processing and assembly protein	Interproscan
IPR002415	Family	H/ACA ribonucleoprotein complex, subunit Nhp2-like	Interproscan
IPR004038	Domain	Ribosomal protein eL8/eL30/eS12/Gadd45	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11679	VESICLE PROTEIN SORTING-ASSOCIATED	Interproscan
PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0006888	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0019905	Molecular Function	syntaxin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0000469	Biological Process	obsolete cleavage involved in rRNA processing	Interproscan
GO:0000470	Biological Process	maturation of LSU-rRNA	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0031118	Biological Process	rRNA pseudouridine synthesis	Interproscan
GO:0031120	Biological Process	snRNA pseudouridine synthesis	Interproscan
GO:0031429	Cellular Component	box H/ACA snoRNP complex	Interproscan
GO:0034513	Molecular Function	box H/ACA snoRNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11129	NHP2, NOLA2; H/ACA ribonucleoprotein complex subunit 2	-	DNA replication proteins	ko03032	deepkoala