Detailed information of g1683.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047135882.1, acid-sensing ion channel 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q708S6Acid-sensing ion channel 1C OS=Danio rerio OX=7955 GN=asic1c PE=1 SV=1
Q6NXK8Acid-sensing ion channel 1 OS=Mus musculus OX=10090 GN=Asic1 PE=1 SV=1
P55926Acid-sensing ion channel 1 OS=Rattus norvegicus OX=10116 GN=Asic1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF08542Rep_fac_CReplication factor C C-terminal domainDomainInterproscan
PF13177DNA_pol3_delta2DNA polymerase III, delta subunitDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR013748DomainReplication factor C, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR050238FamilyDNA Replication and Repair Clamp Loader ComplexInterproscan
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR051300FamilyHMX Homeobox Transcription FactorsInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan
PTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITInterproscan
PTHR46110HOMEOBOX PROTEIN HMXInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00306PIPOX; sarcosine oxidase / L-pipecolate oxidaseEC:1.5.3.1
EC:1.5.3.7
Ion channelsko04040deepkoala
DNA repair and recombination proteinsko03400deepkoala
Peroxisomeko04146deepkoala

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