Detailed information of g169.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RDD36478.1, hypothetical protein TrispH2_011191 [Trichoplax sp. H2]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7Z460CLIP-associating protein 1 OS=Homo sapiens OX=9606 GN=CLASP1 PE=1 SV=1
A1A5K2CLIP-associating protein 1-B OS=Xenopus laevis OX=8355 GN=clasp1b PE=1 SV=1
Q80TV8CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10373EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF12348CLASP_NCLASP N terminalRepeatInterproscan
PF21040CEP104-like_TOGCentrosomal protein CEP104-like, TOG domainRepeatInterproscan
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00990GGDEFDiguanylate cyclase, GGDEF domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024077Homologous_superfamilyNeurolysin/Thimet oligopeptidase, domain 2Interproscan
IPR045090FamilyPeptidase M3A/M3BInterproscan
IPR024080Homologous_superfamilyNeurolysin/Thimet oligopeptidase, N-terminalInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045153FamilyEst1/Ebs1-likeInterproscan
IPR018834DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR024395DomainCLASP N-terminal domainInterproscan
IPR034085DomainTOG domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan
IPR026052FamilyDNA-binding protein inhibitorInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR000160DomainGGDEF domainInterproscan
IPR050469FamilyBacterial Diguanylate CyclaseInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11804PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATEDInterproscan
PTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan
PTHR21567CLASPInterproscan
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan
PTHR11723DNA-BINDING PROTEIN INHIBITORInterproscan
PTHR45138REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEMInterproscan
PTHR44170PROTEIN SIDEKICKInterproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005758Cellular Componentmitochondrial intermembrane spaceInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0006518Biological Processpeptide metabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0005876Cellular Componentspindle microtubuleInterproscan
GO:0005881Cellular Componentcytoplasmic microtubuleInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0040001Biological Processestablishment of mitotic spindle localizationInterproscan
GO:0045180Cellular Componentbasal cortexInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan
GO:0090307Biological Processmitotic spindle assemblyInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0140110Molecular Functiontranscription regulator activityInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0043709Biological Processcell adhesion involved in single-species biofilm formationInterproscan
GO:0052621Molecular Functiondiguanylate cyclase activityInterproscan
GO:1902201Biological Processnegative regulation of bacterial-type flagellum-dependent cell motilityInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16578CLASP1_2; CLIP-associating protein 1/2-Cytoskeleton proteinsko04812deepkoala

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