Gene detail

Detailed information of g1690.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_046368642.2, oral-facial-digital syndrome 1 protein-like isoform X2 [Haliotis rufescens]

Gene Structure

More details in Jbrowse

Sequence

CDS

g1690.t1

ATGGAAGAAAAGGAAAGAAAGGTACCACATCTTGGGCATGGGTTGTCTAAGGCAGATTTTAGAAAGAAGTTGAGTGCCACATTTAAAGCAACAGGAGTGTTAGATGGGGTCAAAAGTCAGATCCGAAGTAGTTTGATTGACAGCCTAAAGAGATCAAACAAGGCAACTTTTCATTTGAAAGAGAACCAattgtcatcatcttcattGGCGTTGATGATTTGTAATAGCTTAATCATTGATCATTTGAAACGCAATCAATTGGACTACACTCTTTCTGTTTTTGAACCAGAAAGCCTTCATACCGGAAACAAGGAGTTTTCCATTGATGACCTTCTAGCATTACTTTGTGtttcaaaacattcaaaactTCATCATGCAATGGTAGACTGTTACAGAGACAAAGAATGCCACAGTTTCCTATGGATTTTactaaatgaaattgtttcaataaaatcaaaaagaaCGGAAAATGAAACACAGACTGACTTTTCTGATGCAGaagCAGATAGACCATTTACAGAATCAAAGAGAAAAGATAAACCGGTAGACGTAGATCAGGCACTGTTTActtttcaacaaaaacaggAACAACGAAAGAAAGCTGAGTTTCAAAGAGAGcttGAAAGATTCAAAAGCAAAGAACTAGCAATGGTGAAGTTAGAAGAAAGAGAAAACTGTTACAATGAAACGGAAACAGCCAAAGCACAGATGCTTGAAAGGGAATTGTTTGATAAAAGACAGACCATCCTGGATGATATGAACAAGCTCAAAATCAGGGAAAATGAAATTGCATTGAAGGAACGCAGACTAGCATATGAGGAGAAGCAATTTGTCAAGGATATTGAAAAAGAGTCTAAAGATGATGAGGTTAACATCATAAAAGTGAAGGAGAAAACTTTTCTAAAACCGGAATTCTTTCAACGGAATGGTCATATGGATGATATCCAAACCATACCTAATGCAACTGACGACGTCAATCAGCACTCTACAATAGCCCAGAATTCACCAAACCAAGCCTACAATCTGCTTGTATCAGAATTTCAACAGAAGAATGCTCTTGTCGATGAACTCAAGAAAGCCCTAGAAATGGAAAAACGAGAGGTAGCTAATTTAACAACAAAGTGCGCTATTCTACCTGAACGCCAAAACAAAATCAATGAATACGAGGCTGTGATTGCTGAGATGAGGAAAGAATTAAATGATCTTCAAACgtACAACAAGCATCTTCTGCAACAAAGTATCGATAAAAGAGGAGATGCCAAGCAATCAAGGCAACAGCCTGCCAGTAAGAGAACTGCAAACAAATCCTCTCAAACAACGACTGCAGTTGATAACGACATGATGCTATCACTCAAATCAAAAGAACAGCATTTactctatcaaaataaaacatttgttgtGAGGCTACAAGCTGAGATGACAAAGAATCAAGAGTTAACACGATTATATGAAGACCAATGTTTACACGTGAGGGAAATGATGAGAGAGATTAATGACCTACAGAATATCATTAAATCACATCAAGCCATATCCGTGTTAGCGGCTGTAACCAATGACAACAAACATCATTCCAATATCCCTGTTACCCATGGCAATGGCCGTGGAAAGGAGATGGTGTCTGCAAGACAGCCTCTTCACCCAAGTGAGGTTGATTCATCCCCTGATATCAGTTATTCAAAGAAACGATTAATCAGCGAATCAAGACAGGTCATTGATCAGATGGACCAAGAAGCCATTGAGCTGGATAGGCAATATGAAGTATTCAATACTCGTCGTCATGACATCTCACCGCAAGTAAAACctcacaacaacaacaacatgctCTCTCCGATTAATCTAATTGGAGCTAGTGTTCATCGTATTGATGACTTTAGCTGGCGTACGAACGGAGCTTATCTCAAGCATCTATTAACAAAAGATGCTAACGATATTGCAAGTGCTCCATCAAACGCCTCCACCTCACCTGGAAATGGTAGGAGTGCCAGTCCTCCTTCTCGTTTGAGTGATATAATTCCTGTGTCTATGCGCTCTAGCAGTCATCCGTTATCATCCACGCATGTCCCAGCCACTTTGTCAACGGACCAAGGATTCAGCGGGCATTTGGCTGGTCTTTCATCTGTACAACCCATTCGATCAATGAGTACTGGATTGCCATCAAATGGAACAACCCATGATTCTCAGAGTGGAACACTTCATTTCAGTGATCTTCGTCACAATGGACTTACAGCGTCAGCTGCTGACAATCAAAACACTCTTATACCTCAAAATAACACATCATCTGTGCCATTACTTGAAAATAGTACTATTGTCAGTCAATCATCTGCTCCGCAACGCGAGTTAATGGCCAATTTTTCTGATCCGACATGTTATTCGTTGACACAGGaacatttatttgattctGTTTCATCTTCAGCCTTTCCCTCTATAACAGAATCTGTTCGCGAGGATCACGTAGCCACTGGTAAACGCAATTCTGCCAAAACTCAACAACGTCGTTTGACGCCTTTGTCAGAAAAAGCTGAAGATGAAACCTCGTCAGGCTTTCGCACAACACAGAGTAATCACTCCAAGCCGCCAAGTGGGACAACAACAACCTCAAAAAGGATAGCGGCACCACCAACAAATCCTGCTTCTTCAGACCATGTGACGTCTCAGTGGGGCAGTGTCCCCAGTGACCAACAAGGTCATCCATCGTTTGGATCTTCGTCATCAGTCGATAGTCAAGGTCTGCGTGAAGCACCAATAATTATTGATGAGTCATCTGTTGCTGCACCATCTATCCCTAACCTAGACTCCCTGTGGCTAAGGGAAAGCAAGACAGAGCAAGAACCACTAGCACCTGCACAAATGCTGAACACTGCTGAAAACGAGGCTGTTGGCTACTCTGCACTATCAGATTATCTAGCAATGATGAAACAACAGAAAAACGATGAAAAGGGATCTGGTAATGACATTTTGGATGATGATCTGGCAGTTGATGTTTTCATTCAAACTCAAGGTGGTGAGGATTTCAAATATCACACATGCCATGCGTGGTTTATTTACAAATGCACTGGGGGTGGAGCAGTCGGCTTATTCGAACACATCAGTCGATCGATTCGGCTGCTGCTCAATTTACGCCTATCTGTCGGTGTCACCAACTCAACTGCAACGATCGTTCGAACTGATGCTCTGACTGGATTGGAACGAAGTTATAGCTTACttgcattattttattaa

Transcript

g1690.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16045	LisH_2	LisH	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594	Conserved_site	LIS1 homology motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39063	ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0060287	Biological Process	epithelial cilium movement involved in determination of left/right asymmetry	Interproscan