Gene detail

Detailed information of g1704.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020628581.1, activating signal cointegrator 1 complex subunit 1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9D8Z1	Activating signal cointegrator 1 complex subunit 1 OS=Mus musculus OX=10090 GN=Ascc1 PE=1 SV=1
Q8N9N2	Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens OX=9606 GN=ASCC1 PE=1 SV=1
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF02995	DUF229	Protein of unknown function (DUF229)	Family	Interproscan
PF00013	KH_1	KH domain	Domain	Interproscan
PF00460	Flg_bb_rod	Flagella basal body rod protein	Family	Interproscan
PF06429	Flg_bbr_C	Flagellar basal body rod FlgEFG protein C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR004245	Family	Protein of unknown function DUF229	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR009210	Family	Activating signal cointegrator 1 complex subunit 1	Interproscan
IPR047538	Domain	Activating signal cointegrator 1 complex subunit 1, type I KH domain	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR019776	Conserved_site	Flagellar basal body rod protein, conserved site	Interproscan
IPR020013	Family	Flagellar hook-basal body protein, FlgE/F/G	Interproscan
IPR001444	Domain	Flagellar basal body rod protein, N-terminal	Interproscan
IPR010930	Domain	Flagellar basal-body/hook protein, C-terminal domain	Interproscan
IPR037925	Homologous_superfamily	Flagellar hook-basal body protein, FlgE/F/G-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR10974	UNCHARACTERIZED	Interproscan
PTHR13360	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1	Interproscan
PTHR30435	FLAGELLAR PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0006307	Biological Process	DNA alkylation repair	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0071978	Biological Process	bacterial-type flagellum-dependent swarming motility	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02391	flgF; flagellar basal-body rod protein FlgF	-	Bacterial motility proteins	ko02035	deepkoala