Detailed information of g1708.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031550555.1, protein FAM199X-B-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8K2D0Protein FAM199X OS=Mus musculus OX=10090 GN=Fam199x PE=2 SV=1
Q6DDX3Protein FAM199X-B OS=Xenopus laevis OX=8355 GN=fam199x-b PE=2 SV=1
Q6PEV8Protein FAM199X OS=Homo sapiens OX=9606 GN=FAM199X PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15814FAM199XProtein family FAM199XFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029672FamilyFAM199X familyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32003PROTEIN FAM199XInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19854TRANSDUCIN BETA-LIKE 3Interproscan
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

TOP