Detailed information of g171.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032238513.1, INO80 complex subunit B isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P24507Synaptotagmin-C OS=Diplobatis ommata OX=1870830 GN=P65-C PE=2 SV=1
Q9HCH5Synaptotagmin-like protein 2 OS=Homo sapiens OX=9606 GN=SYTL2 PE=1 SV=3
Q99N50Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00638Ran_BP1RanBP1 domainDomainInterproscan
PF01370EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan
PF04795PAPA-1PAPA-1-like conserved regionFamilyInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF11878DOCK_C-D_NDedicator of cytokinesis C/D, N terminalDomainInterproscan
PF14429DOCK-C2C2 domain in Dock180 and Zizimin proteinsDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00804SyntaxinSyntaxinDomainInterproscan
PF05739SNARESNARE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan
IPR000156DomainRan binding domainInterproscan
IPR001509DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR005886FamilyUDP-glucose 4-epimeraseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006880DomainINO80 complex subunit B-like conserved regionInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR051889FamilyCentrosomal protein 41Interproscan
IPR021816DomainDedicator of cytokinesis C/D, N-terminalInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR026791FamilyDedicator of cytokinesisInterproscan
IPR027007DomainC2 DOCK-type domainInterproscan
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR006011DomainSyntaxin, N-terminal domainInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR006012Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR045242FamilySyntaxinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23138RAN BINDING PROTEINInterproscan
PTHR43725UDP-GLUCOSE 4-EPIMERASEInterproscan
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan
PTHR10024SYNAPTOTAGMINInterproscan
PTHR44390CENTROSOMAL PROTEIN OF 41 KDAInterproscan
PTHR23317DEDICATOR OF CYTOKINESIS DOCKInterproscan
PTHR19957SYNTAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0003978Molecular FunctionUDP-glucose 4-epimerase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0033499Biological Processgalactose catabolic process via UDP-galactoseInterproscan
GO:0006012Biological Processgalactose metabolic processInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0001786Molecular Functionphosphatidylserine bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0014059Biological Processregulation of dopamine secretionInterproscan
GO:0017156Biological Processcalcium-ion regulated exocytosisInterproscan
GO:0017158Biological Processregulation of calcium ion-dependent exocytosisInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0018095Biological Processprotein polyglutamylationInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0048278Biological Processvesicle dockingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04560STX1A; syntaxin 1A-Cilium and associated proteinsko03037deepkoala
O-Antigen nucleotide sugar biosynthesisko00541deepkoala
Membrane traffickingko04131deepkoala

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